KEGG   Scomber japonicus (chub mackerel): 128374679
Entry
128374679         CDS       T09718                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128374679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128374679
   03016 Transfer RNA biogenesis [BR:sjo03016]
    128374679
   03012 Translation factors [BR:sjo03012]
    128374679
   04131 Membrane trafficking [BR:sjo04131]
    128374679
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128374679
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     128374679
Transfer RNA biogenesis [BR:sjo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    128374679
Translation factors [BR:sjo03012]
 Eukaryotic type
  Elongation factors
   128374679
Membrane trafficking [BR:sjo04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    128374679
Exosome [BR:sjo04147]
 Exosomal proteins
  Proteins found in most exosomes
   128374679
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Gtr1_RagA
Other DBs
NCBI-GeneID: 128374679
NCBI-ProteinID: XP_053190905
LinkDB
Position
15:12384968..12391045
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASEKMGWFKGWKIDRKEGGATGTTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHETLT
EAVPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPIQAESFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIMMAPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVVKKLPSGGKVTKSAQKAEKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccaccggccacctgatctacaagtgcggtggaatcgacaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggtaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgacattgctctgtggaagttc
gagaccagcaggtattacgtgaccatcattgatgcccctggacacagggacttcatcaag
aacatgatcactggtacttctcaggctgactgcgctgtgctgatcgttgctgctggtgtt
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
ttcaccctcggtgtgaagcagctcattgttggtgtcaacaagatggactccactgagccc
ccatacagccagaagcgttttgaggagatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccactgttgcctttgtccccatctctggatggcacggagacaac
atgctggaggccagtgagaagatgggctggttcaagggctggaagatcgaccgcaaggag
ggtggtgctactggtactaccctactggaggctctggactctattatgccccccagccgt
cccaccgacaagcccctgcgtctgcccctgcaggacgtctacaagattggcggtattgga
actgtacccgtcggccgtgttgagactggtatcctgaagcccggtatggtcgtcaccttc
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagactctgact
gaggccgtccccggtgacaacgttggcttcaacatcaagaacgtgtccgtcaaggaaatc
cgtcgtggcaatgtggctggcgacagcaagaacgacccacccatccaggctgaaagcttc
accgcccaggtcatcatcctgaaccaccccggccagatctcccagggttacgcccccgtg
ctggactgccacaccgctcacattgcctgcaagttcagcgagctcaaagagaagattgac
cgtcgttccggcaagaagcttgaggacaaccccaaggctctgaagtccggagacgccgcc
atcatcatgatggcacctggaaaacccatgtgtgttgagagcttctcccagtacccccca
ctgggtcgctttgctgtgcgtgacatgaggcagaccgttgctgttggtgtcatcaagtcc
gtcgtgaagaagctcccctccggtggaaaggtcaccaagtctgcacagaaggctgaaaag
aaaaaatga

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