Scomber japonicus (chub mackerel): 128374679
Help
Entry
128374679 CDS
T09718
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128374679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128374679
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128374679
03012 Translation factors [BR:
sjo03012
]
128374679
04131 Membrane trafficking [BR:
sjo04131
]
128374679
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128374679
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128374679
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
128374679
Translation factors [BR:
sjo03012
]
Eukaryotic type
Elongation factors
128374679
Membrane trafficking [BR:
sjo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
128374679
Exosome [BR:
sjo04147
]
Exosomal proteins
Proteins found in most exosomes
128374679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
128374679
NCBI-ProteinID:
XP_053190905
LinkDB
All DBs
Position
15:12384968..12391045
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASEKMGWFKGWKIDRKEGGATGTTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHETLT
EAVPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPIQAESFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIMMAPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVVKKLPSGGKVTKSAQKAEKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccaccggccacctgatctacaagtgcggtggaatcgacaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggtaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgacattgctctgtggaagttc
gagaccagcaggtattacgtgaccatcattgatgcccctggacacagggacttcatcaag
aacatgatcactggtacttctcaggctgactgcgctgtgctgatcgttgctgctggtgtt
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
ttcaccctcggtgtgaagcagctcattgttggtgtcaacaagatggactccactgagccc
ccatacagccagaagcgttttgaggagatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccactgttgcctttgtccccatctctggatggcacggagacaac
atgctggaggccagtgagaagatgggctggttcaagggctggaagatcgaccgcaaggag
ggtggtgctactggtactaccctactggaggctctggactctattatgccccccagccgt
cccaccgacaagcccctgcgtctgcccctgcaggacgtctacaagattggcggtattgga
actgtacccgtcggccgtgttgagactggtatcctgaagcccggtatggtcgtcaccttc
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagactctgact
gaggccgtccccggtgacaacgttggcttcaacatcaagaacgtgtccgtcaaggaaatc
cgtcgtggcaatgtggctggcgacagcaagaacgacccacccatccaggctgaaagcttc
accgcccaggtcatcatcctgaaccaccccggccagatctcccagggttacgcccccgtg
ctggactgccacaccgctcacattgcctgcaagttcagcgagctcaaagagaagattgac
cgtcgttccggcaagaagcttgaggacaaccccaaggctctgaagtccggagacgccgcc
atcatcatgatggcacctggaaaacccatgtgtgttgagagcttctcccagtacccccca
ctgggtcgctttgctgtgcgtgacatgaggcagaccgttgctgttggtgtcatcaagtcc
gtcgtgaagaagctcccctccggtggaaaggtcaccaagtctgcacagaaggctgaaaag
aaaaaatga
DBGET
integrated database retrieval system