Scomber japonicus (chub mackerel): 128374680
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Entry
128374680 CDS
T09718
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128374680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128374680
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128374680
03012 Translation factors [BR:
sjo03012
]
128374680
04131 Membrane trafficking [BR:
sjo04131
]
128374680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128374680
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128374680
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
128374680
Translation factors [BR:
sjo03012
]
Eukaryotic type
Elongation factors
128374680
Membrane trafficking [BR:
sjo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
128374680
Exosome [BR:
sjo04147
]
Exosomal proteins
Proteins found in most exosomes
128374680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Semialdhyde_dhC
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
128374680
NCBI-ProteinID:
XP_053190907
LinkDB
All DBs
Position
15:12380838..12384698
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEGSDKMGWFKGWKIERKEGNASGTTLLEALDAIVPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPPNLTTEVKSVEMHHESLP
EAVPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKAASSFNAQVIILNHPGQINEGYAPV
LDCHTAHIACKFKELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVEPFSNYAP
LGRFAVRDMRQTVAVGVIKAVDTKEVSGKTTKAAEKASKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaggtccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctccaccggtcatctgatctacaaatgcggtggtatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgacattgctctgtggaagttc
gagaccagcaggtattacgtgaccatcattgatgcccctggacacagggacttcatcaag
aacatgatcactggtacctctcaggctgactgcgccgtgctgatcgttgctgctggtgtt
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
ttcacccttggtgtgaagcagctcattgttggtgtcaacaagatggactccactgagccc
ccatacagccaggcccgttttgaggaaatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccactgttgcctttgtccccatctctggatggcacggagacaac
atgctggagggcagtgacaagatgggctggttcaagggatggaagattgagcgcaaggag
ggcaatgccagcggaaccacactgctggaggctctggacgccattgtgccaccttcccgc
cccaccgacaagcccctccgtctgcccctgcaggacgtctacaaaatcggcggtattgga
actgtacccgtcggccgtgttgagactggtctcctgaagcccggtatggtcgtcaccttc
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagtctctgcct
gaggccgtccccggtgacaacgttggcttcaacgttaagaacgtgtccgtcaaggaaatc
cgtcgtggatacgttgctggtgacagcaagaacgacccacccaaggctgctagcagcttc
aatgctcaggtcatcatcctgaaccaccctggccagatcaatgagggttatgcccccgtt
ctggactgccacactgctcacattgcttgcaagttcaaggagctcatcgagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaagtttgtcaagtctggagatgccgcc
attgtcaaactgatcccacagaagccaatggttgtggagcccttctccaactacgctccc
cttggtcgttttgccgtgcgtgacatgaggcagaccgtggctgtcggtgtcatcaaggct
gttgataccaaggaagtttccggaaagacaaccaaggctgcagagaaggcctccaagaag
aaatga
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