Scomber japonicus (chub mackerel): 128374715
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Entry
128374715 CDS
T09718
Name
(RefSeq) zinc fingers and homeoboxes protein 1-like
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128374715
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128374715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
zf-C2H2_7th_ZNF462
zf-H2C2_5
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
128374715
NCBI-ProteinID:
XP_053190947
LinkDB
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Position
15:complement(3884041..3905177)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSSRRKSTTPCMVPPRETVDSDQEMEDVTEAAESEDANGVATVSSEACGMSEDCGEEADV
RQVSDHYMDLNMAEGGYECKYCSFQTSELNLFTMHVDTEHPDVVINTSYVCVECDYHTKS
YDTLLAHNARLHPGEDNFTRTMVKRNNETIFQQTVNDLTFDGSFIKVEDVEAEETSRKGI
ALSKTPIMRIKSRPEPKKFAALHKMAADDVIKVESDDEDDENKEPPTLSPAPMTPAAVTP
RLIPVSTPMQVQAVPQSIVVNSPNMLQIKGGSGGGGGAVLPPGTLAQVLSALQNQQNSAQ
TQTQLLIPISSIPTYNTAMDNNVLLVSAYNRFPYPSVSEIMGLSSQTKFSEEQIKVWFSA
QRLKHGVSWTPEEVEEARRKKFNGTVQTVPQTITVIPANLAAATNGLQSIFQTCQIVGQP
GLVLTQVSGNGGTVPVASPITLTVAGVPGNQPKAAEPSTSESKTEMSASSSGASLGLDGG
ATKPKKSKEQLAELKASYGRRQFATEAEISRLMQVTKLSKRAIKKWFSDTRYNQRNSKDH
HGVLLSESPSSRAASAGGRGGRNNSGSFNDSNTSNNNNATTTTTAATTATATTTTIVIDS
SDDASDCSPTSANTPGSSGSTSDPRVKFRHAFPDFTPQKFKEKTPEQLLNLEASFQKSDT
PSDEELSRLRAETKLTRREVDAWFTERRKMSKEGDAEGDGEKAKPTAAAPSSSAQERQTT
PPAGRKTMKKTPEQLHILKKAFVRTQWPTGEEYDQMAEESGLPRTYIVNWFGDTRYACKN
SNLKWYYLYQSGKVDEALNGGAKKKPRKRFRGWSRRTRRPYPCKRSPQSVSAIKVKSGKS
FLKDYYLKHRALSEKDLDDLVAKSSMSYEQVRDWFAETARRAEEGKEPFSEEEAEGEEEE
DEEEEEEEGEEEEEEAAAGAEHADSEEEMEVKEQGEEASDEDCNDVVEEEEEKEEEEVVV
EKEDAEEEEEDAEEEEEEVEKEEEEDHETIQEDSQGVSQSQPQAEEQT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaggaggaaatccaccactccctgcatggttcctccccgagagaccgtggac
tcggatcaggagatggaggacgtgacggaggcggccgagtcggaggatgctaacggcgtg
gcgaccgtctcctcggaggcttgcggcatgtcggaggactgcggtgaggaggcggacgtc
cggcaggtgtcagaccactacatggacttgaacatggctgaaggaggctacgagtgcaaa
tactgcagcttccagacgtctgagctcaacctgttcaccatgcacgtggacacggagcat
cccgacgtcgtcatcaacacctcctacgtctgcgtggagtgtgactaccacaccaagagt
tatgacacgctgctggcccacaacgctcgcctccacccgggcgaggacaacttcacccga
acaatggtgaagcgcaacaacgagaccatcttccagcagacggtcaacgacctcaccttc
gacggcagcttcatcaaggtggaggacgtggaggcggaggagacgtcccgtaaaggcatc
gccctcagcaagacgcccatcatgaggatcaagagccgacccgaacccaagaagttcgcc
gccttgcacaaaatggccgcggacgacgtcatcaaagtggaaagcgacgacgaggacgac
gagaacaaggagccgcccacgctgtcgcccgccccgatgacgcccgccgccgtcaccccc
cgactcatccccgtgtccacgcccatgcaggtccaggccgtcccgcagagcatcgtggtc
aacagccccaacatgctgcagattaaaggcggctccggcggcggcggcggggccgtgctg
cctcccgggacgctggctcaggttctgtcggccctgcagaaccagcagaacagcgctcag
acgcagacgcagctcctcatccccatcagcagcatccccacctacaacaccgccatggac
aacaacgtcctgctggtcagcgcctacaacaggtttccgtacccctcggtgtcagagatc
atgggtttatcatcgcagaccaagttcagcgaggagcagatcaaggtctggttttctgct
cagaggctgaaacacggagtcagctggacgcctgaagaggtggaggaggcgaggaggaag
aagtttaacggcacggttcagacggttcctcagaccatcaccgtcatccccgccaacctc
gccgccgccaccaacggcctgcagtccatcttccagacctgccagatcgtgggccagccg
ggcctcgtcctcacgcaggtgtccggtaacggcggcaccgtgcccgtcgcctcccccatc
acgctgacggtcgcgggcgtccccggcaaccaacccaaagccgccgaaccgtcgacgtca
gaatcaaagactgaaatgtcagcttcgtcctccggcgcgtcgctgggtttggacggcggg
gcgaccaaaccgaagaagtccaaggagcagctggcggagctgaaggcgagctacggcagg
aggcagttcgccaccgaggcggagatctcacggctcatgcaggtcaccaaactctccaaa
cgcgcaataaagaagtggttcagcgacacgcgctacaaccagaggaactcaaaggaccat
cacggcgtcctgctgagcgagtctccatccagcagagcggcgtcggcaggaggacgagga
ggacggaacaacagcggcagctttaacgacagcaacaccagcaacaacaacaacgccaca
accacgacgaccgccgccacaaccgccaccgccaccacgaccaccatcgtcatcgactcc
agcgacgacgccagcgactgctccccgacttctgccaacacgccgggctcatcgggctcc
acaagcgaccctcgggtcaaattccgtcacgccttccccgacttcacgccgcagaagttc
aaggagaagactccggagcagctgctcaacctggaggccagcttccagaaatcggacacg
ccctccgacgaggagctgagccggctgcgggcggagacgaagctgacgagacgcgaggtg
gacgcctggttcaccgagaggcggaaaatgtccaaagagggagacgcggagggagacggc
gagaaggcgaaaccgaccgctgccgcgccttcgtcctcagctcaggaacggcagaccact
ccccccgccggcaggaagacgatgaagaagacgccggagcagctccacatcctgaagaag
gccttcgtccgcacgcagtggccgacgggcgaggagtacgaccagatggcggaggagagc
ggcctgcccaggacgtacatcgtcaactggttcggagacacgcgctacgcctgcaagaac
agcaacctgaagtggtactacctctatcagagcgggaaggtggacgaggcgctgaacggc
ggagccaagaagaaacccaggaagcgtttccggggttggtcgaggaggacgcggcggccg
tatccctgtaaacgttctccgcagagcgtctccgccatcaaggtgaagtcggggaagtcg
tttctgaaggactactacctcaaacatcgagctctgagcgagaaagacctcgacgacctg
gtggccaagtccagcatgagctacgagcaggtgagggactggtttgccgagaccgccagg
cgggcggaggagggcaaggagcccttcagcgaagaggaggccgagggagaggaggaggag
gacgaggaggaagaggaagaagaaggagaagaggaagaggaggaggcggcggcgggagcg
gagcacgcagacagcgaagaggagatggaggtgaaagaacaaggagaggaggcatcagac
gaggactgcaacgatgtggtggaggaggaggaggagaaggaggaagaggaggtggtggtg
gagaaggaggacgctgaggaggaagaggaggacgctgaggaggaggaggaggaggtggag
aaggaggaggaagaggaccacgaaacgatccaggaagactctcaaggtgtcagccaatca
cagcctcaggccgaagagcagacatga
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