Scomber japonicus (chub mackerel): 128374738
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Entry
128374738 CDS
T09718
Symbol
rab42a
Name
(RefSeq) ras-related protein Rab-42a
KO
K07925
Ras-related protein Rab-39B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128374738 (rab42a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374738 (rab42a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sjo04031
]
128374738 (rab42a)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
128374738 (rab42a)
GTP-binding proteins [BR:
sjo04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
128374738 (rab42a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
Motif
Other DBs
NCBI-GeneID:
128374738
NCBI-ProteinID:
XP_053190976
LinkDB
All DBs
Position
15:complement(26503612..26509628)
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AA seq
218 aa
AA seq
DB search
MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIESGVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHKEVSEHILPHHMVYIL
IGHKSDLNKDRKVSRDEAEQLAAELGIRYVETSAKCNSNVDRAFELLTKDIYELMKMGEI
VTRDGWDGVKSGLTAKVLYPADDEEELAAATAEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatattttgtggcaatatcagttcaggatcattctactcggggattcaacagtgggg
aagtcgtcgttgctgaagcgcttcacggatggaatttacagcgatgtggcggatccgacg
gtcggggtggatttttatgcccgctcgcttgatatcgagtccggggtgaaaatcaagctt
cagctctgggacaccgctggtcaggaacgattcaggtccatcacaacatcatactaccgt
aactctgtgggggggctgctagtgttcgatctcaccaatcgcaagacctttgaccatgtg
agggagtggcacaaggaggtgagtgagcacatcctgcctcaccacatggtctacatcctc
atcggccacaagagcgacctcaacaaggatcgtaaggtgagccgggacgaggcggagcag
ctcgcggccgagctgggcatccgctacgtggagacgtcggccaagtgcaacagcaacgtg
gaccgggccttcgagctgctgaccaaggacatctacgagctgatgaagatgggggagatc
gtcacccgcgacggctgggacggggtgaagagcggcctcaccgccaaggtcctctaccct
gctgacgacgaagaggaactagctgccgcgaccgccgaaaagggctgccactgctga
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