Scomber japonicus (chub mackerel): 128374751
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Entry
128374751 CDS
T09718
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128374751 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128374751 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128374751 (yars1)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128374751 (yars1)
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
128374751 (yars1)
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class I (A)
128374751 (yars1)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128374751 (yars1)
Prokaryotic type
128374751 (yars1)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128374751 (yars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
128374751
NCBI-ProteinID:
XP_053190993
LinkDB
All DBs
Position
15:complement(22324795..22331289)
Genome browser
AA seq
532 aa
AA seq
DB search
MADQLSPDEKLHLITRNLQEVLGEEKLKQVLQERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESLGVPLDKLKFVKG
TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTLAEKYLPSLGYAKRAHLMNPMVPGLTGAKMSSSEEESKIDLLDSKAD
VKKKLKKAFCEPGNIQNNGVLSFVKYVLFPLRGDFSIKRDPKWGGDKIYSVFEEVEKDFA
EELIHPGDLKASVEEALNQLLDPIRKKFETPELRKLTNSAYPDPSKTKGAGKGAKAGGGG
GTQDDELAPSRLDIRVGKIVSVGKHPDADSLYLEKIDVGEAEPRTVVSGLVAYISQEDLQ
DRNVLVLCNLKPQKMRGIESQAMLLCASIEGEPRRVEPLDPPEGSSPGDRVFVEGYEAGK
ADDRLNPKKKVWEKLQVDLKISDECVAQWQDKQLMTKLGQITCKTLKGGNIS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagctaagcccagatgaaaagttacacctcatcacgaggaacctccaggag
gtccttggagaggagaagctgaagcaggttcttcaggagagggagctgaaggtgtactgg
ggcacagcaaccactggaaaaccccacgttgcttactttgtccccatgtccaagattgca
gacttcctcaaggccggatgtgaggtcactattctgttcgcagacttgcacgcttaccta
gacaacatgaaggctccctgggagctgctggagctcagggtgaagtactatgaacaggtc
atcaaggccatgttggagagcctcggtgtcccgctggataagctcaagtttgtcaaagga
acagattaccagctcagcagagagtacactctggatgtgtaccgcctgtcctccatggtg
acagaacacgacgccaagaaggctggagctgaggtggtcaaacaggtggagcatcctctg
ctgagtggtctgctgtaccctggactacaggccctggatgaggagtacctgaaggtggac
gctcagtttggaggagttgaccagagaaagattttcactctggcagagaagtacctgccc
tctcttggctatgctaagcgcgcccatctaatgaacccaatggtaccaggactgacaggt
gccaagatgagctcctcagaagaagagtcaaagatcgatctactggactcaaaagcagac
gtgaagaagaagctgaagaaggctttctgtgagccgggcaacatccagaacaacggagtc
ctctcctttgtcaaatatgtcctcttccctctacgcggagatttctccatcaaaagagac
cccaagtggggaggagacaaaatctactctgtgtttgaagaggtggagaaggacttcgct
gaggagctgattcacccaggagacctgaaggcctcagtggaagaagcactcaaccaactg
ctggatccaatcagaaagaagtttgagacacctgagctccgcaaactcaccaactctgcc
taccccgacccctcaaagacaaaaggagcaggaaagggtgccaaggctggaggaggagga
ggaacacaggatgatgagctggcaccctccagactggacatccgggtgggcaagatcgtc
agtgtggggaagcatccagacgccgattctctgtacctggagaagattgacgtaggagag
gcagagccgaggacggtagtcagcggactggtggcctatatctcacaggaggacttgcag
gacagaaatgtgctggtgctgtgcaatctgaaaccccagaagatgcgtgggattgaatct
caagcaatgctgctatgtgcctctattgaaggggagcccaggagggtggagcctctcgat
cctccggaggggtcatcgccaggggatcgggtctttgtggaggggtatgaggcaggcaaa
gcagatgacagactcaacccaaagaagaaggtgtgggagaaactacaggtcgacctgaag
atatcagacgagtgtgtagctcagtggcaagacaagcagctgatgaccaaactaggacag
atcacatgtaagacactgaaaggaggcaacatcagttaa
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