Scomber japonicus (chub mackerel): 128374834
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Entry
128374834 CDS
T09718
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00564
Glycerophospholipid metabolism
sjo00565
Ether lipid metabolism
sjo01100
Metabolic pathways
sjo04144
Endocytosis
sjo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128374834 (pld1a)
00565 Ether lipid metabolism
128374834 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128374834 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128374834 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374834 (pld1a)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
128374834 (pld1a)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128374834 (pld1a)
Endosome - Golgi transport
Others
Others
128374834 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DUF3785
DBD_HTH
Motif
Other DBs
NCBI-GeneID:
128374834
NCBI-ProteinID:
XP_053191030
LinkDB
All DBs
Position
16:complement(10773679..10802988)
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AA seq
1052 aa
AA seq
DB search
MLGKAQPTTSNLNLVKSEVSDLSVVSDVHDGINMADLVESLDTRELDMGEGEEVDDGSCL
GDSRIPFSAVYATVGFKEATAKVYLATVPITARILEVERFTTAQDRFNLSHHRSVNKSLP
AVFKIELKHGEFTWMVKRKEKHFMELHRELRTYKTFMRIPLPSRSHTVRRKTVRKSEVRE
MPSLPRGGGDELARDEQVSSRRRQLEDYLNKLLKMAMYRKYHHTMEFIDVSQLSFIHDLG
PKGLEGMIYKRSGGHRIPGMNCCGHSQACYRWSKRWLVVKDSFLLYMKPDTGAISFVLLV
DKEFSIKMDSKETETKHGVRIDSLSRALVFKCISYRHARWWGQSIESFVRSHGKAFLRDH
RFGSFAQEEENIPAKWYVNGKTYMEDVADALEEAKEEIFITDWWLSPEIFLKRPVVEGNR
WRLDCILKRKAQQGVRIFVMLYKEVELALGINSGYSKRTLLHLHPNIKVMRHPDHVSSSV
YLWAHHEKIVVIDQSVAFVGGIDLAYGRWDDKEHRLTDVGSVTRSVALEQASSNTPSSKG
VSSVDGISHSNGRGTPPSDPVDLPKLKGLGRSRKARFSLYKHLHKHTMQPADSVSSVDSA
GSGSVRSLKTGVGELQGNTRFWHGKDYCNFVYRDWIQLEKPFDDFIDRYTTPRMPWHDIA
SVVHGRAARDVARHFIQRWNFTKIMKPKYRSLSYPFLLPKSHSSASELRYQVPDSVNAKV
QVLRSAADWSAGIKYHEESIHNAYIQVIAKSKHYIYIENQFFISCADNRTVYNKIGDAII
ERIIRAHKEGKKYRVYVVTPLLPGFEGDITTGGGNAIQAVMHFNYRTMIRGEYSIISQLK
KEMDDQWMNYISFAGLRTHCELEGRLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGK
RDSEVAVIIEDSEKVASVMDGQEFEAGPYALQLRLECFRTILGGHTDTSIDLSDPISDRF
YKEVWMTTAGRNASIYEKVFRCLPSSTVRNTSELEEFLSKPGLAQSDLARAQEELRRIRG
FLVQFPLDFLSEHNLMPSVGTKEAMVPTEIWT
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtaaggctcagcccactaccagtaacctcaacctggtgaagtcagaagtttct
gacctctcggtggtctcggacgtacacgacggcatcaacatggccgatcttgtggagagc
ttggacaccagagagctggacatgggggaaggagaggaggttgatgatggaagctgctta
ggggacagtcgtatcccattttcagcggtttatgccacagtggggtttaaggaggccact
gctaaggtctaccttgccactgtgcccatcactgcccggatccttgaggtggagagattc
accactgcacaggaccgcttcaatctgtctcaccacaggagtgtcaacaagtctctgcct
gcagtgtttaagattgagctgaagcacggtgagtttacctggatggtaaagagaaaggag
aaacatttcatggagctgcacagagagctgaggacatacaagaccttcatgaggataccg
ctgccatcacgcagccacacagtgaggaggaagacagtgaggaagagtgaagtgagggag
atgccctcgctgcccaggggaggaggagatgaactggcgcgagacgaacaggtctctagc
aggaggagacaattagaagactatttgaacaagctgctgaagatggccatgtaccgcaaa
tatcaccatactatggagttcattgacgtcagccaactgtctttcattcatgacttgggg
cccaaaggactggaagggatgatttataagcgctcaggggggcatcgtatccctggcatg
aattgctgtggccacagccaggcctgctaccgctggtccaaacgctggctggtggtgaag
gattcattcctgctgtatatgaagccggacacaggggccatctcctttgtcctgctggtg
gataaagagttcagcatcaagatggactccaaagagacagagaccaaacatggagtcagg
atcgatagcttatccagggctttggtgtttaagtgcatcagctacagacacgcccgctgg
tggggtcagagcatcgaaagctttgtaaggagtcatggaaaggctttccttcgagatcac
cgctttggatcatttgcacaggaagaggaaaacatacctgccaaatggtatgtgaatgga
aagacttacatggaggatgtggctgatgctttggaggaggctaaagaggaaatattcatc
acagactggtggttgagtccagagatcttcctgaagagacctgtggtggagggtaacaga
tggaggctggactgtatcctcaaacgcaaagcacaacaaggagtgcggatatttgtgatg
ttgtacaaagaggtggagctcgccctgggcattaactcaggttacagtaagaggaccctc
ctgcacctgcaccccaacatcaaggtgatgcgtcatccagatcacgtctcctcctccgtc
tatctgtgggcacatcatgaaaagatcgttgtcattgaccaatcagtggcctttgttggt
gggattgacctcgcgtatggtcgctgggacgacaaagagcatcggctgacggatgttggc
agtgtgacacgttctgtggccctggagcaggccagctccaacactccatccagtaagggc
gtgtcttctgttgatggcatctcccacagcaacggacgaggcaccccgcccagtgatcca
gtggacttgcccaaactgaagggactaggtcgcagtaggaaggctcgcttcagtctctac
aaacacctgcataagcacaccatgcagccagcagacagtgtcagcagtgtcgacagcgca
ggcagtggttcagtgcgaagcctaaagaccggtgttggagagttacaggggaacactcgc
ttttggcatggaaaggactattgcaactttgtctacagggactggattcagctcgaaaaa
ccttttgatgactttatcgacaggtacaccactcccagaatgccttggcatgacatcgcc
tcagtggttcatggcagagctgcccgggatgtggcgagacacttcattcagcgctggaac
ttcacaaagatcatgaagccaaagtatcggtctctgtcttatccattcctgctgcccaag
tctcactccagtgccagtgagctcagataccaagtccctgacagtgttaatgccaaagtg
caggtgttacggtcagcagctgactggtcggcaggcataaagtaccatgaggagtccatc
cataatgcctacatccaagtcatcgccaagagcaaacactacatctacatagagaaccag
ttcttcatcagctgtgccgacaataggacagtctataacaagattggagatgctatcatc
gaaaggatcatcagagcacacaaggagggtaaaaagtaccgtgtgtatgtggtcacccct
ctgcttcctggttttgagggggacatcaccacaggaggagggaatgccatccaggctgtc
atgcacttcaactacagaaccatgatcagaggagaatactccatcatctcccagctgaaa
aaagagatggatgatcagtggatgaactatatctccttcgctggtctgcggactcactgt
gagctggagggacgcctggtaacagagctcatctacgtccacagcaagatgctcatcgct
gacgacaacacagtcatcatcggttctgctaacatcaatgacagaagcatgctgggtaaa
cgtgacagtgaggttgcagtgattattgaggactctgagaaggttgcctctgtgatggat
ggacaggaatttgaagctggaccctatgcgcttcagctgcgcctggaatgctttaggact
attcttggaggtcacactgacaccagcattgacctgtctgaccccatcagtgatcgcttc
tataaggaggtgtggatgaccacggctggccgcaatgccagcatttatgagaaggtcttt
cgctgccttccttcatccaccgtgaggaacacgtctgagcttgaggagttcctatccaaa
ccgggtttggcccaaagtgatctggcccgtgctcaggaggagctgcgcagaatcagaggc
ttcctggtccaatttcctctggatttcctgtctgagcacaacctcatgccctctgttgga
acaaaggaggccatggtcccaactgagatctggacataa
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