Scomber japonicus (chub mackerel): 128374848
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Entry
128374848 CDS
T09718
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128374848 (elavl1a)
03041 Spliceosome [BR:
sjo03041
]
128374848 (elavl1a)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128374848 (elavl1a)
mRNA cycle factors
Stress granule specific factors
128374848 (elavl1a)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
General mRNP proteins
128374848 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_3
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
128374848
NCBI-ProteinID:
XP_053191046
LinkDB
All DBs
Position
16:11294636..11303085
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AA seq
348 aa
AA seq
DB search
MAVRRGHIKYLKADLQEVYDMSNGYEDHMGGDEGKDAKTNLIVNYLPQSMTQDELRSLFS
SIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDADRAISTLNGLRLQSKTIKVSYARPSSD
TIKDANLYISGLPKSMTQKDVEDMFSRYGRIINSRVLVDQATGTTGASRGVAFIRFDKRA
EAEDAVKNLNGQKPPGASEPITVKFAANPNQVKNTQLISQLYHNQSRRFGGPLHHQAQRF
RFSPMGVDHMGSMGSVGVPGNSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRD
FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKGHK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcgtcgaggacacattaagtacttgaaagctgacctgcaggaggtttatgac
atgtcgaacggttatgaagaccacatgggaggggacgaggggaaggacgccaagaccaac
ctgatagtgaactacctgcctcagagcatgacgcaggacgagctgcggagcctcttcagc
agcatcggagaggtggagtccgccaagctgatccgagacaaagtcgcaggccacagttta
gggtacggatttgttaactatcttaaccctagtgatgcagacagagctatcagtacactg
aatggactaaggctacagtccaaaactatcaaggtctcatacgcacgacccagctctgat
acaataaaggatgctaacctgtatatcagcggcctgcccaagtctatgacccagaaggat
gtggaggacatgttttcacgttatggtcgcattattaattcccgtgtacttgttgaccag
gccacaggtacgacaggtgcgtcccgtggagtggctttcattcggtttgacaagcgggcg
gaagcagaagatgccgtcaaaaacctgaacggccaaaagccacccggggcctccgagcca
atcacagtgaaattcgcggccaacccgaaccaagtgaagaacacgcagctcatctctcag
ctctaccacaaccagtccaggcgtttcggagggcctttacaccaccaggcacagcggttt
aggttctcccctatgggcgttgatcacatgggcagcatgggaagcgtcggcgtccccggg
aactccacctccggctggtgcatcttcatctacaacctgggccaggacgcagacgagagc
atcctgtggcagatgttcggcccctttggcgccgtcaccaacgtcaaggtgatccgagac
ttcaacaccaacaagtgcaagggtttcggcttcgtcaccatgacgaactacgaggaggcg
gccatggccatcgccagcctcaatggctaccggctcggagacaagatactgcaagtgtcc
tttaagaccagcaagggccacaagtag
DBGET
integrated database retrieval system
