Scomber japonicus (chub mackerel): 128374877
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Entry
128374877 CDS
T09718
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128374877 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374877 (rab11fip5a)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128374877 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
128374877
NCBI-ProteinID:
XP_053191085
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All DBs
Position
16:complement(6600717..6635009)
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AA seq
628 aa
AA seq
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MDTLSVDDDQKWVPTHVQVTVLKGRGLRGKGKHGTSDVYTIIQIGKEKYSTCVVEKTTEP
EWREECCFELQPGVLERGGRCAYPAGSNELILTVMHRALIGLDVFLGQAVIHLDKVFHES
RCLKNEWYRLNSKTGKKEKERGDIQVTVQFTRNNLTASMYDLVMKDKTGSTFRKLKERIK
GKRRASEEDSSSAILPSGYGSVYRMRQRLPSDGGGEEDYEDDEGGEARRSKMRNFFLRGK
LRKSSDTRSSTSLGSESSESSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTAN
TSPRSSSLRCEFGDETGEITIAVPQPTVCVNGSHAYKVQHLDPGSGKPADSLGVGLLQKS
LPLSMSLQNLSPRAATDLPKGTVGDGRRWSFDKPGEEEKAAIAAALEQSGPMVGDEEECL
EQTAPPSSSSSTAESESQGKKQRRNLFSHGKSESAGKRTSQSKDESEQALAATEEKHRGW
FGSKDSHSKPSPHPVKPLTTAMLAEEKRTEGRSVLATGLEKLKSTIHPGRSSHLSEQETE
RKKSLTEGAGSYYHLNHSELVALLVQREAELERQKAEFKHQKALLAKREVELRKLKPQVR
DLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacacgttaagcgtagacgacgatcagaaatgggtaccgacacacgttcaggtgacg
gtgctaaaaggcaggggattacggggcaagggcaagcatggcaccagcgatgtgtacacc
atcatccagattgggaaggagaaatactcgacctgcgtggtggagaagaccaccgagccg
gagtggagggaggagtgctgcttcgagctgcagcccggtgtgctggagagaggcgggcgg
tgcgcatacccggccgggagcaacgagctcatcctcaccgtgatgcaccgggctctgatc
gggctcgacgtgttcctcggacaggctgtgatccatctggataaggtgtttcacgagagt
agatgcctgaaaaacgagtggtacagactcaactccaagacggggaagaaggagaaggag
cgaggagacattcaagtcaccgtccagttcaccagaaacaacctgacagcgagcatgtac
gacctggtcatgaaggacaagacgggatccacgttccgcaagctgaaagagcgcataaag
gggaagaggagagccagcgaagaggactcctcgtcggccatcctaccgagcggctacggg
tccgtgtaccgcatgcgccagcggttgcccagcgacggaggaggggaggaggattacgag
gacgatgaggggggcgaggcccgtcggagcaagatgaggaactttttcctgagagggaag
ctgaggaagtcgtcggacactcgctccagcacatcactaggttcagagagcagcgagtcg
tctcggggagggagtctcagccccacagctggaatcagcgtggtggtctcggacctctcc
aactcgcccagtaacagcagtaacctgacagcagataacagtccagagcacacagctaac
acatcacccaggtcgtcttctctcagatgtgagttcggtgatgagaccggtgagatcacc
atcgcagtgcctcagcccactgtgtgcgttaacggaagccatgcttacaaagtccaacac
ctggacccaggctcaggaaaacctgcagattctttaggcgtgggactgttgcagaagtcg
ttgcctctctccatgtctctacagaacctcagcccgcgagccgccacagacctccccaaa
ggcacggtcggagacgggcgccgctggtcttttgacaaacccggcgaggaggagaaagct
gccatagcggcggccctggagcaaagtggccccatggtgggtgacgaagaggagtgcttg
gaacagactgctccgccctcctcctcttcctccacggcagagtcggagagtcaggggaaa
aagcagaggaggaacttgttctcccacgggaagagcgagtctgcggggaaaaggacgagt
cagtccaaggatgagtctgaacaggccctcgctgccactgaggagaaacacaggggatgg
ttcggatcaaaggactcacacagcaaacctagcccccacccagtgaagcccctgaccact
gccatgctggctgaggagaagcggactgaaggccgatcagtgctggccaccggcctcgag
aagctcaagtccaccatccatccggggaggagcagccatctcagcgagcaggagacggag
aggaagaagtctctgacagaaggagcgggctcgtactaccacctcaaccacagcgaactg
gtcgccctgctggtgcagcgtgaggcggagctggagaggcagaaggcggagttcaagcat
cagaaagctctgctggccaagcgggaggtggagctgaggaagctgaagccgcaggtccga
gatctggaggactacattgacacgctgctggttcgcatcatggagcagaaacccactctc
ctgcaagtgcgctccaagttgaagtga
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