Scomber japonicus (chub mackerel): 128374948
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Entry
128374948 CDS
T09718
Name
(RefSeq) piRNA biogenesis protein EXD1-like
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128374948
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128374948
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF1179
Motif
Other DBs
NCBI-GeneID:
128374948
NCBI-ProteinID:
XP_053191143
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Position
16:18401040..18406571
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AA seq
567 aa
AA seq
DB search
MVVSDVEFLNILKGKRIKLTLKTASYLGVVQRINPNKTLILADVVSGSNGCKCPGSKMFF
GHEILNVEFTSEANSDSGNIHEHTLEDHLTVKKFQPYKNTITLDDDDEDDEEFINFVVID
EFHEKFGPAVMHIKRQRVIGVGVDGVEVYEHGRLCWLQIATKNKVYLFDILLLGARAFKN
GLSMILESKHILKVIHDCRAIAGCLNTQFGVKLTNVFDTQVADVMCFYSETGGFLPDRVS
TLQEVVSLHLKVPSSQLLSLKMKSQLTKEEMEMWYTRPCPIPLLKVMALSVIHLQPLRLV
LLDALMMDYMALVDSYLNSSHYAPDELGHVSMESVLELPRELRQLEQMRCERQEWAADQY
PVTEKGLLARFYPRTNKTPSHTSPAGDAQPDSFGPATVESPSTQVDSLLQRPPTRPSRVT
DVSSAQSVDAPTTQDPVPATESDLSKKVSGLSLGVGRGRTEVVMETVGRGRSFGKEQSCI
QTLPAIGRGFLLQIPPAQIPIERNRDMKVAGRMEVGPSCHSLKPSQAGMPQPHTSATDLP
KDIFSLRGDRSSESSKLLLSSFRSFRY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgagcgacgtcgagttcctgaatatcctgaaggggaaacgcatcaaactgacc
cttaagactgcatcttacctcggcgttgtccaacgtatcaaccccaacaaaacgctgata
ttggcggacgttgtaagtggcagtaatgggtgcaaatgtcctggatccaaaatgttcttt
gggcatgagattctcaatgtggaatttaccagtgaagctaactctgacagtggaaatatt
catgagcacacacttgaagaccacttgactgtgaaaaagtttcagccatacaagaacaca
atcacactggatgatgatgatgaagacgatgaggaatttatcaattttgtagtcatcgac
gagtttcatgagaaatttggacctgctgtgatgcacatcaagaggcagcgtgtgattggt
gttggagttgatggagttgaggtgtatgagcatgggagactgtgttggctgcagattgcc
actaaaaacaaggtatacctatttgatatcctgttacttggagcccgagcctttaagaac
ggtctctccatgatcctggaaagtaagcacatactaaaggtcattcatgattgcagagca
attgctggatgtctgaatacccagtttggagtaaagttaaccaacgtctttgacacacag
gtggcagatgtcatgtgcttctactcagagacgggaggtttcctccccgatagagtcagt
actctccaggaggtggtgagtctccatctgaaggtaccctcctctcagctcttatccctg
aagatgaagtcacaactcaccaaggaggaaatggagatgtggtacacacgtccgtgtccc
atacccctgctgaaggtgatggctttatcagtgatccacctgcagccactcagactggtg
ctgttggatgctctgatgatggactacatggcgctggtggattcctacctcaacagcagc
cactacgcgcctgatgaattggggcacgtaagcatggaaagtgtgttggagttgcccaga
gagctccggcagctggagcagatgcgttgtgagcgccaggagtgggctgccgaccaatac
cctgtcactgagaagggtttgctggctcgcttctatcccagaaccaataagactccatct
cacacctcgcctgcaggagatgcacagccagactcctttggacctgcaactgtggagtca
ccttcaacacaagtggactctctccttcaacggccacccacgaggccctcgagggtcact
gatgtttcctctgcccagtctgtggatgccccaacaactcaggatccagtccctgccact
gagtcagacctcagtaaaaaagtgtctggcctgtctctgggtgtaggcagaggacgcaca
gaggtagtgatggaaacagtaggtagaggaaggtcctttgggaaagagcagtcatgcatt
cagaccttgcctgccataggaagaggctttcttctccaaataccaccagctcagatcccc
atagagcgcaatagagacatgaaagttgctggtaggatggaagtgggtccttcatgccat
agcctcaagccctcccaagcaggaatgccccagcctcacactagtgctactgacttacct
aaggacatttttagcttgagaggagaccgttcctcagagagttccaagttgctcttatcc
tcattcaggtctttcagatactga
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