Scomber japonicus (chub mackerel): 128375002
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Entry
128375002 CDS
T09718
Symbol
syne3
Name
(RefSeq) nesprin-3
KO
K21761
nesprin-3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128375002 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128375002 (syne3)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
128375002 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
SR_desmoplakin_3
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
128375002
NCBI-ProteinID:
XP_053191195
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All DBs
Position
16:complement(28601722..28657860)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTQQEQQEFTESLEAALSWMRAIQERLKANDNTQGPRDALEARLRETEKIHQSEHEGRVK
MDMALVAADNLLQSGDEELKNHTHTELKKLKTLWEETCTYIVHCHSRIEWVWLHWSEYLK
AYEEFELWLTRQQRSLDVAVELQLGLKEKLWQVDQQRVMVSDIQGQATLLERLLDEAAAL
HNRTQDPSVEPQAQETLQEAYNDIRDRAEERLTLLQKMAEEHQTYQGCVQRFQSWLLSKT
KELMDLMDREDTAENKLKALQVLDDSVASEEKTLQHIEGLSEAVRANTSPAGAEVVVEEA
EELRLGWQRLRQGLCEAEEGLRSNLDSHSQYMTRCQRLGDDIGRIRMMLQGLDHELVGGH
EGGDQAERTEDQIVGQWRKYTGVRNTLAGEESQVEHLKAQLKELFRFPQDSHHLSDDVLA
VVKEHQSVKCRATRLCSESESGLRNILQDPLLVYAQWSHMVSQVLEASADVTDFSHIAMM
VQNIERLLKDSVHLQERFSLLQVKGDLLESVFGPERSDGLQGELSAAMRNRELLHSQLLQ
RKSRLQGLISRTKDFGDAYRSIHSKLASLRDRLVAADGRQPDILAKKSQSDQFRVIHKDL
EDSEAHILALETLVSNSQNNRTQFEKLYADWKCLHKAVRVKMLESEDGIAEHESFHDSLL
NVEKWLMIMKQKLESFYSPAGGWSIEGRRHEAQRALGEFPEKELQLQQMDVQGQEVLKRT
SEEGRVHIIRDMQRLQESWLALYNMSLNLHRLLNSSTEQPELSVGGADSQSRAGGSKIQR
GQERSGREGSLGGDTGEGGEWIQAQAEEHEEEHLNMSRTNRDSERPPAGVEEDTSAWSAH
NRAVQRVSTTDGSPHSDKSTGSDSSVSATARGHKPASTQVIYGDGGAVSSGEGSVEAGES
LSQGGGAFVLFRRDPARQPATAPSQDTRGSTGQYESRRREFEAWLCRENELLTEILRSNG
ATLSDTEVRMRQKKLNGLKAGVNWGQEQFQLLLQEVQGSEVASGPAEDVGLEELRYRWML
YKSKLKDVGDIRVRASAKRVQAKEDEPAAVTAKVQKKPGLLHRVCRLALPLWLLLLALLL
LAFLLPLMDEGSSCSLSNNFARSFNIMLRYDGPPPT
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaggagcagcaggagttcacggagagcctggaagcagccctctcctggatg
cgggccatccaggagaggctgaaggcgaatgataacacccaggggccccgggatgctctg
gaggccaggctcagggagacggagaaaatccatcagtctgagcatgaaggtcgggtgaag
atggacatggctctggtggcagcagacaacctgctgcagagcggagatgaagagctgaag
aaccacacacacactgaactcaaaaagctgaagaccctgtgggaggagacctgcacctac
atcgtccactgccacagtcggatagagtgggtgtggcttcactggagcgagtacctgaag
gcctacgaggaattcgagctgtggctgacaaggcagcagcgtagcctggacgtcgctgtt
gaactgcagctgggcctgaaggagaagctgtggcaggtggatcagcagagagtgatggtg
agcgacatccagggccaggcaacgctgctggagaggctgctggatgaagctgctgcactg
cacaacagaacccaggaccccagtgtagagcctcaagcccaggagacactgcaggaggcc
tacaatgacatcagagacagggccgaggagcgtctgacgctgcttcagaagatggctgag
gaacaccagacgtaccaaggatgcgttcagaggttccagtcctggctgctgtcaaaaacc
aaggagctgatggatctgatggacagggaggatacagcggagaacaagctcaaagcctta
caagttctggatgacagcgtagccagcgaggagaaaaccctgcagcacatcgagggtttg
tcagaagctgtgagggctaacacctctcctgcaggggcggaggtggtggtggaggaggct
gaggagctgagactgggctggcagagactaaggcagggcctgtgtgaggcagaggaaggc
ctgcgctccaacctggactcacacagtcagtacatgacccgctgccagaggctgggagac
gacatcggacgaatcaggatgatgctgcaggggctggaccatgaactggtggggggtcat
gagggtggagaccaggctgagcgcactgaggaccagatagttggccagtggaggaaatac
acaggtgtgaggaatactctggcaggggaggagtcccaagtggagcacctgaaagctcaa
ctcaaggagctcttcaggttcccgcaggattcacaccacttgtctgacgatgtcctggct
gttgtcaaagaacatcagagtgtgaaatgcagagcgaccagactgtgttcagagtcagag
tccggcctgagaaacatcctccaggacccgctgctggtctatgctcagtggagtcacatg
gtctctcaggttttagaggcttctgctgacgtcaccgacttctcccacatcgccatgatg
gtccagaacatcgagcgtctgctgaaggacagcgtccatctgcaggagcgtttcagtctg
ctgcaggtgaagggagacctgctggaatctgtgtttggtcctgagagatctgatggtctg
cagggtgagctcagtgctgccatgaggaacagagagctgctgcacagtcagctgctgcag
aggaagagcagactgcaggggttaatctcaagaaccaaggactttggtgacgcttacagg
tccattcactctaagctggccagtctcagagacagactggtggcagctgatggtcgtcag
cctgacatcctggccaagaaaagccaatcagaccagttcagggttatccataaggacctg
gaggacagtgaggctcacatcctggctctggagactctggtgtccaacagtcagaacaac
aggactcagtttgagaagctctatgctgactggaaatgtcttcacaaggcagtcagggtg
aagatgcttgaaagtgaggacggcatcgcagagcacgaaagcttccatgacagcctgctg
aacgtagagaaatggctcatgatcatgaagcagaagctggagtccttctacagccctgca
ggaggatggagcatagagggccgcaggcatgaagctcagagagcactgggagagtttcca
gagaaggagcttcagctgcaacagatggatgtccagggtcaggaggttctgaagaggact
tcagaagaaggaagagtccacattatcagagacatgcagcgtcttcaagagtcctggttg
gccttgtacaacatgagtctcaatctgcacaggctgctgaatagctctacagagcagcca
gagctcagtgtcgggggggcagacagtcagagcagagcaggaggctctaagatccagaga
ggccaagaaagatcaggcagggaaggaagcctggggggagacacaggggaggggggtgag
tggatccaggcacaggctgaggaacatgaagaagaacacctcaacatgtcaagaacaaac
agggacagtgagcgcccccctgcaggagtggaagaagacacctctgcatggagcgctcac
aacagagcagtccagagagtttccaccactgacggaagtcctcacagcgacaagtcaaca
gggagcgacagcagcgtgtcggccacagccagagggcataaaccagcaagcacacaggtg
atctatggtgacgggggcgcagtgagctctggagaaggcagcgtggaggcaggagagagc
ctgagccagggaggaggagcgtttgtgctgttcagaagagatccagccaggcagccagcc
actgcaccaagtcaagacacaaggggaagcacggggcagtatgagtccaggaggagggag
tttgaggcctggctgtgcagagagaatgaactcctcacagagatcctcaggtccaatgga
gccacactcagtgacacagaagtcaggatgcgacagaagaagctcaatggtctgaaggct
ggagtgaactggggtcaggagcagttccagcttctgctccaggaggttcagggtagtgag
gttgcttctggaccagcagaggatgtgggtctggaggaacttcgttaccgctggatgctc
tataaatccaagctgaaggatgtaggagacatcagagtcagggccagtgccaagagagtc
caagccaaagaggatgagccagcagctgtcacagcaaaggtgcaaaagaagcctgggttg
ctgcatcgggtgtgtcggctggctcttcctctgtggctgctcctgctggctctgctgctg
ctggccttcctgctgcccctcatggatgaaggtagcagctgctccctctcaaacaacttc
gcccgatctttcaatattatgctccgctacgacggaccaccacccacatag
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