Scomber japonicus (chub mackerel): 128375008
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Entry
128375008 CDS
T09718
Symbol
rrh
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128375008 (rrh)
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Vision
Opsin
128375008 (rrh)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_2
Motif
Other DBs
NCBI-GeneID:
128375008
NCBI-ProteinID:
XP_053191201
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Position
16:31388979..31400220
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AA seq
336 aa
AA seq
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MGIDSGVNVSDDVSPYAGESAFTQLEHNIVAGYLITAGVISLMSNIVVLLMFVKFKELRT
ATNFIIINLAFTDIGVAGIGYPMSAASDIHGSWKFGYTGCQIYAALNIFFGMASIGLLTV
VAIDRYLTICRPDIGQKMTVRSYNLLILAAWLNAVFWSSMPIVGWAGYAPDPTGATCTIN
WRQNDASFISYTMAVIAVNFVLPLTVMFYCYYNVSATARRYKASNCLDSINVDWSDQMDV
TKMSIVMIIMFLVAWSPYSMVCLWASFGDPKTIPAPMAIIAPLFAKSSTFYNPCIYVIAN
KKFRRAIIGMIRCQTRQRITINTQVPMTTSQQPLTN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggggattgactctggagttaatgtttcagatgatgtttcaccttacgcgggtgaaagt
gcctttacccaactggagcacaacatagtggctggatatctaatcactgcaggtgtcatc
agtttaatgagcaacattgtggttctgctgatgtttgtgaagtttaaggagctccgcact
gccaccaacttcatcataatcaacctggccttcactgacatcggggtggctggtatcggt
tatcccatgtcagctgcttcggacatccatggcagctggaaatttggctacactggttgt
cagatatatgcagctctcaacatcttctttggcatggccagtatcggcctgctgactgtg
gtggccattgaccgctacctcaccatatgcagaccagacataggacagaaaatgacagtg
cgatcatacaaccttcttattctggcagcatggcttaatgctgtgttctggtcctccatg
ccgatagtaggctgggctggatatgctcctgaccccaccggagctacatgcaccatcaac
tggaggcagaatgatgcatccttcatttcttacacaatggcagtgattgctgtaaacttt
gtgttgcccctgacggtcatgttttactgctattacaacgtgtcagccactgcgaggaga
tataaagccagcaactgcctggacagcatcaacgtggactggtcggaccagatggatgta
actaagatgtccatagtgatgatcatcatgttcctggttgcctggtctccgtactccatg
gtgtgtctctgggcatcgttcggtgaccccaagacgatccctgcccccatggctatcatc
gctccgctctttgccaagtcctccactttttacaacccctgcatttatgtcattgccaac
aaaaagttcagaagggccatcatagggatgattcgatgtcaaacaaggcagcggatcacc
atcaatacccaggttcccatgacaacgtctcaacaacctctgaccaactga
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