Scomber japonicus (chub mackerel): 128375022
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Entry
128375022 CDS
T09718
Symbol
ppie
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase E
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128375022 (ppie)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128375022 (ppie)
03110 Chaperones and folding catalysts [BR:
sjo03110
]
128375022 (ppie)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
128375022 (ppie)
Spliceosome [BR:
sjo03041
]
Complex B
Other components
Prp19-related factors
128375022 (ppie)
Complex C
128375022 (ppie)
Chaperones and folding catalysts [BR:
sjo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128375022 (ppie)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_5
RRM_7
RRM_occluded
DUF4944
Motif
Other DBs
NCBI-GeneID:
128375022
NCBI-ProteinID:
XP_053191215
LinkDB
All DBs
Position
16:complement(21014504..21018654)
Genome browser
AA seq
302 aa
AA seq
DB search
MATSKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDA
AAAIDNMNESELFGRTIRVNIAKPMRIKEGSSRPVWSDDDWLKKFSGKTTEEGEEESAAG
ETPNTAAQEGEPPAKKGRVNPQVYMDIKIGNKPAGRLRFLLRADIVPMTAENFRCLCTHE
KGFGYKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGRKFDDENFVLKHTAPGQLSMANS
GPNSNGSQFFLTTDKTDWLDGKHVVFGELVEGMDVLRAIEAQGAKDGKPKQKVIISDCGE
YV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagcaaacgagtgctgtatgtcggtggtctggcagaggaggtggacgagaag
gtgttacatgcagctttcatcccatttggagacatcacagacatccagatacctttagac
tatgaaacagaaaagcacagaggatttgcgttcattgagtttgagctggcggaggatgct
gcagcagctattgataacatgaacgagtctgagctttttggaaggactattcgggtcaac
atagccaagcccatgagaatcaaagaaggttcctctcgaccagtgtggtcggatgatgac
tggctgaagaaattctcagggaagaccacagaagagggtgaggaggagtcggcagcggga
gaaacacccaacactgctgcacaagagggtgagcccccagctaaaaagggcagagtcaat
ccacaggtctacatggacatcaagatcggcaacaagccggcagggagactacgcttcctt
cttcgggctgacattgttcccatgacagcagagaacttccgctgcttatgcacacatgag
aagggctttggctacaagggcagcagcttccaccgcatcatccctcagtttatgtgccaa
ggaggtgactttaccaaccacaacggcaccggcggcaagtccatctatggccggaagttt
gacgacgaaaactttgtcctgaaacacaccgctccagggcagctctccatggccaactct
gggccgaacagtaatggctctcagttcttcctcaccaccgacaaaacggactggttggac
ggcaaacacgtggtgtttggagagctggtggaggggatggatgtgcttcgtgcaattgag
gctcagggagcgaaagatgggaagccgaagcagaaagtcatcatctcagactgtggagaa
tatgtgtaa
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integrated database retrieval system
