Scomber japonicus (chub mackerel): 128375035
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Entry
128375035 CDS
T09718
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375035 (arhgef10)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128375035 (arhgef10)
Membrane trafficking [BR:
sjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128375035 (arhgef10)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128375035 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
Beta-prop_VPS8
DAM-like-phage1
Motif
Other DBs
NCBI-GeneID:
128375035
NCBI-ProteinID:
XP_053191234
LinkDB
All DBs
Position
16:complement(19894477..19944217)
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AA seq
1452 aa
AA seq
DB search
MDVEDFPPPPPEMLADNVAFADEDEGEAFDFDDSGDDIPEADRPPPAPPTPLASGGKDQS
QNNNVPSHPKGHLPSPDPPAPSTASNIAPSSQHTTVATSRSSTAGGATAEGEETSAAEGS
DDKETDLLPPPPPPFPLDEDAETDPERTGSEGQEEASNNLHPPQAVPRTSSQGKVNPYSV
IDITPFQLEQLEQQHGPSSSPSSPGEPKEREGEAQDFHTSPGGITSGYSVPVPCGYATPS
GVPLITPAYTTPVIIRHLSMDEDVMVVGTGSACVDSVFSEEYPPIREEDALAKWASDPAN
TAWMENPDEVIYDDVPRENSDSNTEPDEMIYDDVEFGEEGGCNSSLDNGWSSSEFESYDE
ASDGEGRPENGLPHAFMRGKPPQRKTHLSQDLTRLKEHYEKKMKDLMANTVGTVELQQLK
QKQEQKMQKLVKAAKEGTKDGLEKTKAAVKKGRSFIKTKSFYNERKSACFEDEESQVFIE
VDCFNVEPVLGPVPEGLSQQQLVRRCILGSILESEKNYLDALKRILEQYEKPLSQIEPRL
LSDRKLKMTFYRVREILQCHFLFQIALASRVAEWDSLEMIGDVFVASFSKSMVLDAYSEY
VNNFSTAMAVVRKTCTSKPGFLEFLKHRQETSSDRMTLYGLMMKPIQRFPQFILLLQDML
KNTPVGHADRLPLQMALTELETLAEKLNEKKREADQRCEIRHIAKAMNERYLNKLLSNGS
RYLIRSDDMVETVYNERGEIIKTKERRLFLLNDVLMCATPNIRFQDGSGSGSGSAPLDQR
FLLKWSVPLSFVEVLEFGSSEDMADHTRYQTPHSGEKVVINAKPNKLYMGPGQLYQDLQN
LIHDLSLVNQIASMISSLKGNYQNVNPTVAQDWVSGLQRLILKKEEEIRAADRCRIQLQL
PGKQDKSGKPTYFSAVFNTLNPAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIKKQ
KHPLLLRQMPVVMSKLQEFKVECAVHNPEPHINTETTADTPIVGHGCVWVASCTNQMGQI
AIVAMQNCSPKVTECFNVESRILCMTFVPAELPQENGEKVPENNNVPPAKASDTPTVCLG
MEEGSIIVYKSSQRSKKVRLQHFFTPDKSTVTSLVYKKHCLYVGLVSGSVAIYSRSQDGL
WNCDKPTVLKLGVLPVKSMLAVEEHLWASSGGQVFIISTHTHCVERQLEAHQEEGMVVSH
MVVAGVGIWIAFSSGSTLRLFHTETLEHLQDINIATPVHNILPGNQRVSVSSLLVCHGLL
LVGTNLGVTVALSVPRLQGIPKVTGRGMVSLHAHNGPVKFLTVAAAVCNRLSGLPSSTPP
TSVQPTEAEDGESVQPPSDSALTPPRGRGVWLGEAGCTTMALQDSLSSSSCGSLAQSQGS
LEHGPEDGALYDVLHDPAHHQRGRRASKVDVSSLLVVSGGSGHRRVNKKTKQSRHEDTTS
TIMIWQIPLLNM
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaagactttcctcccccgcctcctgaaatgttggcagacaatgttgccttt
gcagatgaagatgagggagaagcttttgactttgatgacagtggtgatgacatccccgag
gctgaccgcccaccccctgcacctccaactcctctagcctccggcggcaaagatcagagc
cagaacaacaatgtgcccagtcaccccaagggtcatctccccagtccagaccccccagca
ccttccaccgcatccaacatagccccatcatcacaacacacaacagttgccacgagcaga
tcctccacagcaggtggagcaacagcagaaggagaggagacatctgctgctgaggggtct
gatgacaaggagacagatttactaccacctccacctccaccctttcctcttgatgaagat
gcagagacagatcctgaaagaacagggagtgaaggccaggaggaggccagcaataacctg
caccctccacaagcagtccccaggacctcctcccagggaaaggtcaacccctactctgtg
attgacatcactcccttccagctggagcagctggagcagcagcatggaccctcctcttcc
ccttcctcaccaggggaacccaaagaacgagagggagaggctcaggatttccacaccagc
cccggcggcatcacctcaggctattcagtgccggtgccctgtggctatgcaaccccctct
ggtgtacccctcatcacgccagcttacaccacacccgttatcattcgacacctctccatg
gatgaggatgtcatggtggttggaactgggagcgcttgtgttgatagtgttttcagtgaa
gagtatccacctattagagaagaggatgctttggcaaaatgggcgtctgatcctgccaac
actgcatggatggaaaatccagacgaggtgatttacgatgacgtgcccagagagaactct
gactccaacacagaaccagatgagatgatctatgatgatgtggagtttggcgaggagggt
ggctgcaatagttccctcgacaatggttggagctcaagcgagtttgaaagctatgacgag
gccagcgacggggaaggtcgccctgagaatggcctgccccacgccttcatgagagggaag
ccaccccagaggaagacccatctctctcaagatctgacacgcttgaaagaacactatgag
aaaaagatgaaagatctaatggcaaatacagtgggaacggtagagctgcagcagctaaaa
cagaaacaagagcagaagatgcaaaagctggtgaaagcagctaaagaagggaccaaagat
ggccttgagaaaaccaaagctgcagtgaagaagggacgctccttcattaaaaccaagtca
ttctataatgagaggaagtcggcctgctttgaggatgaggagtctcaagtcttcattgag
gtggactgtttcaacgttgagccagtcttgggtccagtcccagagggcctttcacagcaa
caactggtgagaagatgtatattggggtctatactggagagtgagaagaactatctcgat
gcactgaagaggatattagagcaatatgagaagcccctatcccagattgagccgaggcta
ctgagtgacaggaaactgaagatgaccttctaccgagtgcgtgagatcctgcagtgccac
ttcctgttccagatcgcactggcgagccgtgtggcggagtgggacagcctggagatgatc
ggcgatgtctttgtggcgtcgttctcaaagtccatggtgctggatgcctacagtgagtat
gtgaacaactttagcacagcaatggcagtggtgaggaagacctgcacatctaaacctggc
ttcctggaattcctgaagcatcgacaggagaccagcagtgacagaatgactttgtatggc
ctgatgatgaagcctatccagagattcccacagttcattctgctcctccaggacatgctg
aaaaacacacctgtgggtcacgcagaccgtttgcccctgcagatggctctgaccgaactt
gagacgctggctgagaaactcaatgagaagaaaagggaagccgaccagcgctgcgagatc
cgtcacattgcaaaggccatgaacgaacgctacctcaacaagcttctgagtaatggcagc
cgctacctgatccgctcagatgacatggtggagacggtctacaatgagcgtggtgaaatc
atcaaaactaaggagcgacgactcttcctgctcaatgatgttctcatgtgtgccacgccc
aatatccgatttcaggatggcagcgggagcggcagtggcagtgccccactcgaccagagg
ttccttctgaagtggagtgtgccgctgagctttgtggaagtgctggagtttggatccagt
gaggacatggccgaccacacccgctaccagacaccccattctggggagaaggtggtcatc
aacgctaagccaaacaagctgtacatgggcccgggtcagctgtaccaagatctgcagaac
ctaatccacgaccttagcttggtcaaccagatcgccagcatgatcagcagccttaaaggc
aactaccagaatgtaaaccccacagtggcccaggactgggtatcgggtctccagaggctg
attctgaagaaggaggaggagatcagagcagctgaccggtgtaggattcagcttcagctg
cctggcaaacaagacaagtcgggtaaacccacttacttcagtgcagtgttcaataccctc
aacccagccatcaaacagtcatggatcagtaacttgcagatggccaagctggctctagag
gaggacaacctgcagggctggttctttgcagaggatgatgggaaccagatcaaaaagcag
aaacaccctctcttgcttcgacaaatgcctgtggtcatgtcaaaactgcaggagtttaag
gtggagtgtgctgttcataacccagagccccacatcaacacagagactacagcagacact
cccatcgtgggccatggctgtgtctgggtggcaagttgtacgaaccagatgggccagata
gccatagtggccatgcagaactgcagccctaaggtgacagagtgtttcaatgtggagtcc
cgtatcctctgcatgaccttcgtcccagcagagctaccccaggagaatggcgagaaggtt
cctgaaaacaacaacgtccctccagcaaaggccagtgatacgcccactgtctgtctgggc
atggaggagggcagcatcattgtgtataaaagtagccagcggtccaaaaaagtacgtctg
cagcatttcttcaccccagacaaatctactgtcaccagcctggtctataagaaacactgt
ttgtacgtcggcctggtcagcggctctgtggccatctactcccgatcacaagatggtttg
tggaactgtgacaagcccacggtgctgaagctgggagtcctcccagttaagtccatgctg
gcagtggaggagcacctctgggcttcatcaggtggacaggtcttcatcatcagcacccac
acacactgtgtggagaggcagctggaggcccaccaggaggagggtatggtggtgtcccac
atggtggtggccggggtgggcatttggattgcctttagctctggttccactcttcgtctt
ttccacactgagaccctggaacacctgcaggatattaacattgccacacctgtccacaat
atactgcctggcaaccagagagtgtcagtgagcagtctgctggtgtgccatggtctgctt
cttgtaggaaccaacctgggggtgactgtggccctctctgtgccccgactgcagggcatc
cccaaggtcacaggtcggggtatggtgtccctgcacgctcacaatggaccagtgaagttc
ctcactgtggcagctgccgtgtgtaaccgtctctctggccttccatcctccacccctccc
acctcggtgcagccaacagaggcagaggatggagaaagcgttcagcccccctcagattca
gccctgactccccctcggggacgaggcgtatggctgggagaggcgggctgcaccaccatg
gctctccaggactccctgtcctcctcgtcctgcggctccctagcacagtcccagggctct
ttggagcacggacctgaggacggggctctttatgatgtgctccatgacccggcccaccac
cagaggggccgccgggcaagcaaggttgacgtgagctctctgctggtggtatctggaggt
tcaggccaccgcagggtcaacaaaaagaccaaacagtcacgtcatgaggacaccacctct
accatcatgatctggcagatccccttactcaacatgtga
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