Scomber japonicus (chub mackerel): 128375038
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Entry
128375038 CDS
T09718
Symbol
rtn1a
Name
(RefSeq) reticulon-1a
KO
K20721
reticulon-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375038 (rtn1a)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128375038 (rtn1a)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128375038 (rtn1a)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128375038 (rtn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
128375038
NCBI-ProteinID:
XP_053191239
LinkDB
All DBs
Position
16:16759451..16779440
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AA seq
734 aa
AA seq
DB search
MSAQPGEELGSEGKWFGDDYERNGLLGNTPTRFDELREDFKPRGSEATSDLDQQFHPFQD
DGKRPPVAMETASTDDSMSDLFGKPMNDDCDVYTSLRSNQSFTSGQEASYLSDDLKSSKS
TSGSSALDHFSTDTYSFSSSTKMTSDLTDDMPKSLMGLDKTESYNYMDISHGDERHDQHQ
GPLHSLMDISSTGRDLLGGYIDKNPGRDEEEEEEDENLGPALGSHSFPYVEEPSDEELSD
YRSYRNLGGTPQTASPVKITLTESQPPAAKVEPQQPLPPVTVSERENVLSVGLQGVPTVT
LSEPEDDSPASTPNASPTHKEFPSHDMFKADAMKPAAPKSSPGTKASSREHDGSSAESGD
SEIELVSEEPPKASSNPFAEPPKSKSAFSQPNSPFDNPPVAKGGFGLAGNHAPPTAYSIL
REEREAELDSDLFIESASEESPKREQGFSGPKQGVSTPSPLVPSTLPAPSAPEVVPAEPL
ITEKVKTLVKEEDRLSKPKPPTAAVPPEVRSERPHQDDMFKHTNEGKDDVGKPAASIFPE
GLSKQKAIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYK
SVLQAVQKTDEGHPFKAYLEIEIALSQDQISKYADKILLYTNTCMRELRRLFLVQDLVDS
LKFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVVG
KIQAKIPGAKRKEE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcagcccggcgaggagctaggctcggaggggaagtggtttggggacgactat
gagagaaacggattgcttgggaacacaccgacccggttcgacgagctgcgggaagatttc
aagccgagaggcagcgaggcgacgagcgacctggatcaacaatttcatcctttccaggac
gacgggaaaaggcctcccgttgctatggaaactgcatctacagatgactccatgtctgac
ctgtttgggaagcctatgaatgacgactgtgatgtgtacacttccctgcgatccaatcag
agcttcacatcaggccaagaggcttcctacctgtcagacgacctgaagtcctccaagtcc
acctctggctcctctgccctggaccacttttccactgacacctacagcttcagctccagc
accaagatgacttccgatctgaccgatgacatgccaaaatctctgatgggcttagataag
acagaatcctacaactacatggacatcagccacggggatgagcgccatgaccaacaccag
gggcctctgcacagcctgatggacataagctcgaccgggcgtgacttgctgggcggctac
atagataagaaccccggaagagatgaggaggaggaagaggaagatgagaacctaggtcca
gcactgggctcccactctttcccctacgtggaggagccatctgatgaagagctgtcagac
taccgctcctaccgtaacctgggggggactccacagacagccagccccgtgaagatcacc
ttgaccgagtcccagcctccagccgccaaggtcgagccacagcagcccctccctccagtc
actgtgtctgagcgtgaaaacgtcctgagtgtgggcttacagggtgttcccactgtgaca
ctatcagagccagaggatgacagccctgcttccactcccaatgcttcaccaacacataaa
gaattcccttctcatgacatgttcaaggctgacgcaatgaagcctgcagctcccaagagc
agtccaggcacaaaggccagcagtagggagcatgatggcagcagtgcagagtctggagac
tcagagattgagttggtgtccgaggagcctcccaaggccagtagcaacccatttgccgag
ccgcctaaaagcaagagtgctttcagccaacctaacagcccttttgacaatcccccagtc
gccaagggtggtttcggcctggctggcaaccacgctccacccacagcctacagcattctg
agggaggagagagaagcagagcttgacagtgatctcttcattgaatctgcgtctgaagag
agcccaaagagagagcagggcttcagtggccccaaacagggagtaagtactccctctccc
ctggttcccagtactctccctgcccccagtgcccctgaggtagtgccagccgagcctctg
atcacagaaaaggtcaagaccctggtgaaggaagaggatcgcctcagcaagcccaaaccc
ccaactgccgctgtgcccccagaggtgcgatcagagaggccacaccaggacgacatgttc
aagcacaccaatgagggcaaagatgacgtaggaaaaccggccgcctccatcttcccagaa
ggcttaagcaaacaaaaagctattgacctgctctactggaggaatgtcaagcagtcgggg
gccgtgttcagcagcgtgctcctgcttctcttctccctgacccagttcagcgtggtcagt
gtcggagcctacttagccctggcagccctctctgcaaccatcagtttcaggatctacaag
tctgtgcttcaggctgtgcagaagactgatgagggacatccattcaaggcctacctggag
atcgaaattgctctatcccaggaccagattagtaaatatgccgacaaaatcctgctgtac
accaacacctgtatgagggagcttcgtaggctgttcctcgtacaagatctggtcgactcc
ttgaagtttgctgtgctgatgtggctgctgacctatgtgggtgctctcttcaatggcctg
acactgctcatcctagctgtggtctccatgttcactatgcctgtggtctacgagaaacat
caggcacagatcgatcaatatgtgggactaatacggacccaggtcaactctgtggtggga
aagatacaagcgaagatcccaggggccaagagaaaggaggagtag
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