Entry |
|
Symbol |
si:ch211-79m20.1
|
Name |
(RefSeq) protein naked cuticle
|
KO |
K17386 | platelet-derived growth factor subunit B |
|
Organism |
sjo Scomber japonicus (chub mackerel)
|
Pathway |
sjo04810 | Regulation of actin cytoskeleton |
|
Brite |
KEGG Orthology (KO) [BR:sjo00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128375087 (si:ch211-79m20.1)
04020 Calcium signaling pathway
128375087 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128375087 (si:ch211-79m20.1)
04540 Gap junction
128375087 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128375087 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:sjo04052]
128375087 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:sjo00536]
128375087 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:sjo04052]
Cytokines
Growth factors (RTK binding)
128375087 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:sjo00536]
Heparan sulfate / Heparin
Growth factors/receptors
128375087 (si:ch211-79m20.1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:10278120..10294603
|
AA seq |
568 aa
MRSWVLLLLLAALSAARLRLGSAEGDPLPTSLVDLVRNSPISSVDDLKLLLQQETNAIEE
EEDEHDILTNHTHGRYTRSLVDAPQAQQAACKVRTEVMEVTRSMLDRRNANFLLWPLCVE
VQRCSGCCNSRLLQCVPTVTSSRYLQVVKIQYINRKVHYDKAIISVEDHVSCRCQAPSSS
SSSSSSSSSSSSSSVPISHSSAQSNPNPPPPPPPPQQPPPSSHLPRTAHPAPPKTHTSKA
DLHRHDDLKHNQQHYRTEEREPVARQWQQGSYTQLVHWTQPRVHQAQTHVQAGVHQPITG
VIRPVSSWPSEARGEHSIMAGAQPVGQGSGYEGSREEGSVGVANSGSGVHHPDHAQRQQQ
LVQHQQKHHHQQQQTPFQPYNRGGSEDYHLNTPQSDSASALVNPTQSPKSEQYATSPEPA
KQKDSVTSQKNTEVTNQKQTKTETASHKEGNEREESGSANSGDSAGADLANQGQKKDSKV
TSGDGHLTEEERRLKLLEMVQREPDPQTHLHPHHPHQRPKPTTFKTVVSTAAPVSLSARQ
APFRPASPRRRRKHRKRISKAAMRAMIM |
NT seq |
1707 nt +upstreamnt +downstreamnt
atgagatcctgggtcctgctgctgctactggctgcgctttcagcggcccgtctgcggctc
ggcagcgctgagggcgatccgctccctacgtcgctggtcgacctggtgaggaactctccc
atctcctctgtggatgacctgaagctgttgctgcagcaggagactaatgcaatagaagag
gaagaagacgagcatgatattctcacaaaccacacccacggccgatacactagaagtctt
gtggatgcaccgcaagctcagcaggcggcgtgtaaagttaggacggaggtgatggaggtg
acgaggtccatgctggaccgccgcaacgccaacttcctgctgtggccgctatgcgtggag
gtgcagcgatgttcgggctgctgcaacagcaggctgctgcagtgcgtccccactgtcacc
tccagcagatacctacaggtggttaagatccagtacataaacaggaaagtccactacgac
aaagccatcatctcagtggaagaccacgtcagctgcaggtgtcaagctccctcatcgtct
tcatcgtcctcctcgtcttcttcatcctcttcctcctccagtgttcccatctctcactcc
tccgctcagagcaaccccaacccccctcctcctccacctccaccacagcagcctcccccg
tcctcccacctcccacggaccgcccaccctgctccacccaagactcacacctccaaggct
gacctccatcgccacgacgacctgaagcacaaccagcagcactaccgcaccgaggagcgc
gagccggtggcgaggcagtggcagcaggggagctacacccagctggtgcactggactcaa
cctagggtgcaccaagctcaaacccatgtgcaggcgggggtgcaccagccaattactggg
gtgatcaggccggtcagcagctggccatctgaagcgaggggggagcacagtatcatggca
ggtgctcagccagttgggcaagggagcggatatgaagggagcagggaggagggcagcgtg
ggcgtagcaaacagcggcagtggcgtgcatcatcccgatcatgcacagaggcagcagcag
ttggtacagcatcagcagaaacatcatcaccaacaacagcagacgccatttcagccgtat
aaccgcggaggatcagaggattatcacctcaatactccccaatcagacagcgcctccgca
cttgttaacccaacccagtcgcccaaatcagaacaatacgccacctctcccgaacccgcc
aaacagaaagactcagtgaccagccaaaaaaatacagaggtcacgaatcaaaaacagacg
aagactgaaacagctagtcataaagaagggaacgagagggaggaaagcgggtcggccaat
agcggggactcggccggggcggatctggccaatcagggacagaaaaaagactctaaagtg
accagtggggacggtcatttaacagaagaggagaggaggctgaaacttctggagatggta
cagagggaaccagacccacagactcatcttcatccacatcatcctcaccaaagaccaaag
ccaaccacatttaaaacagtcgtctctactgcggctcccgtgtcactgtcagcccgtcag
gctccgttccgaccggcctcgcctcgccgcaggaggaaacaccgcaaacgcatcagcaaa
gcagccatgagagccatgatcatgtag |