KEGG   Scomber japonicus (chub mackerel): 128375087
Entry
128375087         CDS       T09718                                 
Symbol
si:ch211-79m20.1
Name
(RefSeq) protein naked cuticle
  KO
K17386  platelet-derived growth factor subunit B
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04010  MAPK signaling pathway
sjo04020  Calcium signaling pathway
sjo04510  Focal adhesion
sjo04540  Gap junction
sjo04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128375087 (si:ch211-79m20.1)
   04020 Calcium signaling pathway
    128375087 (si:ch211-79m20.1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128375087 (si:ch211-79m20.1)
   04540 Gap junction
    128375087 (si:ch211-79m20.1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128375087 (si:ch211-79m20.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:sjo04052]
    128375087 (si:ch211-79m20.1)
   00536 Glycosaminoglycan binding proteins [BR:sjo00536]
    128375087 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:sjo04052]
 Cytokines
  Growth factors (RTK binding)
   128375087 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:sjo00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   128375087 (si:ch211-79m20.1)
SSDB
Motif
Pfam: PDGF PDGF_N DUF2106
Other DBs
NCBI-GeneID: 128375087
NCBI-ProteinID: XP_053191321
LinkDB
Position
2:10278120..10294603
AA seq 568 aa
MRSWVLLLLLAALSAARLRLGSAEGDPLPTSLVDLVRNSPISSVDDLKLLLQQETNAIEE
EEDEHDILTNHTHGRYTRSLVDAPQAQQAACKVRTEVMEVTRSMLDRRNANFLLWPLCVE
VQRCSGCCNSRLLQCVPTVTSSRYLQVVKIQYINRKVHYDKAIISVEDHVSCRCQAPSSS
SSSSSSSSSSSSSSVPISHSSAQSNPNPPPPPPPPQQPPPSSHLPRTAHPAPPKTHTSKA
DLHRHDDLKHNQQHYRTEEREPVARQWQQGSYTQLVHWTQPRVHQAQTHVQAGVHQPITG
VIRPVSSWPSEARGEHSIMAGAQPVGQGSGYEGSREEGSVGVANSGSGVHHPDHAQRQQQ
LVQHQQKHHHQQQQTPFQPYNRGGSEDYHLNTPQSDSASALVNPTQSPKSEQYATSPEPA
KQKDSVTSQKNTEVTNQKQTKTETASHKEGNEREESGSANSGDSAGADLANQGQKKDSKV
TSGDGHLTEEERRLKLLEMVQREPDPQTHLHPHHPHQRPKPTTFKTVVSTAAPVSLSARQ
APFRPASPRRRRKHRKRISKAAMRAMIM
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgagatcctgggtcctgctgctgctactggctgcgctttcagcggcccgtctgcggctc
ggcagcgctgagggcgatccgctccctacgtcgctggtcgacctggtgaggaactctccc
atctcctctgtggatgacctgaagctgttgctgcagcaggagactaatgcaatagaagag
gaagaagacgagcatgatattctcacaaaccacacccacggccgatacactagaagtctt
gtggatgcaccgcaagctcagcaggcggcgtgtaaagttaggacggaggtgatggaggtg
acgaggtccatgctggaccgccgcaacgccaacttcctgctgtggccgctatgcgtggag
gtgcagcgatgttcgggctgctgcaacagcaggctgctgcagtgcgtccccactgtcacc
tccagcagatacctacaggtggttaagatccagtacataaacaggaaagtccactacgac
aaagccatcatctcagtggaagaccacgtcagctgcaggtgtcaagctccctcatcgtct
tcatcgtcctcctcgtcttcttcatcctcttcctcctccagtgttcccatctctcactcc
tccgctcagagcaaccccaacccccctcctcctccacctccaccacagcagcctcccccg
tcctcccacctcccacggaccgcccaccctgctccacccaagactcacacctccaaggct
gacctccatcgccacgacgacctgaagcacaaccagcagcactaccgcaccgaggagcgc
gagccggtggcgaggcagtggcagcaggggagctacacccagctggtgcactggactcaa
cctagggtgcaccaagctcaaacccatgtgcaggcgggggtgcaccagccaattactggg
gtgatcaggccggtcagcagctggccatctgaagcgaggggggagcacagtatcatggca
ggtgctcagccagttgggcaagggagcggatatgaagggagcagggaggagggcagcgtg
ggcgtagcaaacagcggcagtggcgtgcatcatcccgatcatgcacagaggcagcagcag
ttggtacagcatcagcagaaacatcatcaccaacaacagcagacgccatttcagccgtat
aaccgcggaggatcagaggattatcacctcaatactccccaatcagacagcgcctccgca
cttgttaacccaacccagtcgcccaaatcagaacaatacgccacctctcccgaacccgcc
aaacagaaagactcagtgaccagccaaaaaaatacagaggtcacgaatcaaaaacagacg
aagactgaaacagctagtcataaagaagggaacgagagggaggaaagcgggtcggccaat
agcggggactcggccggggcggatctggccaatcagggacagaaaaaagactctaaagtg
accagtggggacggtcatttaacagaagaggagaggaggctgaaacttctggagatggta
cagagggaaccagacccacagactcatcttcatccacatcatcctcaccaaagaccaaag
ccaaccacatttaaaacagtcgtctctactgcggctcccgtgtcactgtcagcccgtcag
gctccgttccgaccggcctcgcctcgccgcaggaggaaacaccgcaaacgcatcagcaaa
gcagccatgagagccatgatcatgtag

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