Scomber japonicus (chub mackerel): 128375133
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Entry
128375133 CDS
T09718
Symbol
pals1a
Name
(RefSeq) protein PALS1 isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128375133 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128375133 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
PDZ domain-containing proteins
MAGUK family proteins
128375133 (pals1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
SH3_1
L27
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128375133
NCBI-ProteinID:
XP_053191378
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All DBs
Position
16:26049078..26071747
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AA seq
673 aa
AA seq
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MTTSHLNGHVAGEGGGGGGGGGDEELRGGQQHREMAVDCPGELGSRTLPVRRSAQLERIR
QHQEDLRRRREEEGRQMDLNASLRLKKLSQNPHIGIDNPTFLQDSYSPQQPPLGSQHTHA
LLELEELLLSLKQVRGCLSDQQSQNDIELVLALLNKSDFQSALKIHNAVANSMHRPSPPY
PHTHQALQLAMEVRNVIQSSQNKEGLELHSLLTDTHIQSLLLAHDSIAEIEMEPEPLPTQ
GETLTQWGGETVKIVRIEKAQDIPLGATVRNEMDSVVISRIVRGGAAERSGLLSEGDEIL
EINGIEIRGKDVNQVFDILADMHGLLTFVLIPSTQSKPPPVKESVVHVKAHFDYDPSDDP
YVPCRELGLSFQKGDILHIISQADPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQT
IEEDKEPEKSGKLWCAKKNKRKRKKLLYNAHRNDDIDNEEILTYEEMALYHQPANRKRPI
ALIGPTSCGQAELRQRLLNNQLERFAGAVPHTTRSRRDGELSGRDYHFVSRQTFEAELSA
GKLIESGDFEKNLYGTSTDSVRQVINTGKICVLCLHTQALKVLRSSDLKPYIIFIAPPSQ
ERLRALLAKDNKNPKPEELRDIIEKAREMEQSCGHLFDAIIVNTDQDKAYTELLRLINKL
DTEPQWVPCSWLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctcccatctgaacggccatgttgctggagagggaggaggaggaggaggagga
ggaggagatgaagagctgaggggaggacagcaacaccgggaaatggccgtagactgtccg
ggagagctggggagccggacgctgcccgtcagacggtccgcacagctggagaggatacga
cagcatcaggaggaccttcgtcgccgcagagaggaagagggtcggcagatggacctgaac
gcctcgctgcgactcaagaagctctcccagaatccccacatcggcatcgacaaccccaca
ttcctgcaggactcgtattcaccgcagcagccgccgctcggcagccagcacacacacgcg
ctgctggagttggaggagctgctgctgtcactgaagcaggtccgaggctgtctgtccgac
cagcagagtcagaatgacatagagctggttcttgcactactaaacaagtctgacttccag
tcagcgctgaagatccataatgccgtggccaacagcatgcaccggccctcccctccatac
ccacacacacaccaggcgctgcagctggcaatggaggtcaggaatgtcatccagtcaagt
caaaacaaagagggactcgaactccacagcctgctgacagacacacacatccagtcattg
cttctggcacatgacagcatagcagagatagaaatggagcctgaaccgctgcccacccag
ggagagacgctgacccagtggggaggagagactgtgaagatagttcgcatagagaaggcc
caggacataccactgggagcgactgttcgtaatgaaatggacagcgtcgtgatcagtcgt
atcgttcgaggcggagcagccgaacgtagcggacttttatcagaaggagacgaaatattg
gagataaacggcatagagatcagagggaaagatgtcaaccaagtctttgatattctcgcg
gacatgcacggcctcctgacctttgtgctcatccccagcactcagagcaaacctcctcct
gtcaaagagtctgtggtccatgtgaaggcacatttcgactacgacccctcagacgacccg
tacgtgccgtgcagagagctgggcctgtccttccagaaaggagacatcctccacatcatc
agccaggcagaccccaactggtggcaggcttacagggacggagacgaggataaccagcct
ctcgctggactggtaccagggaagagtttccagcagcagagagaagccatgaaacagacc
atagaagaagacaaggagcctgagaagtctgggaagctgtggtgtgcaaagaagaacaag
aggaagagaaagaagcttctgtacaacgctcacaggaacgatgatatcgataacgaggag
attctcacctatgaggagatggcgctgtaccaccaaccggccaataggaagcggcccatc
gcgctgatcgggccgaccagctgcggacaggcggagctcaggcaaagactgctcaacaac
cagctggaacgattcgccggagccgtgcctcacaccacacggagccgcagagatggagag
ctgagtggaagagactaccactttgtgtctcgtcagacgtttgaggcagagctgtcagct
gggaagctgatagagtctggagattttgagaagaacctgtacgggaccagtacagactct
gtgagacaggtcatcaacacgggcaaaatctgtgtgctctgtctacacacgcaggctcta
aaggtgctcaggagttcagacctgaaaccttacatcatcttcatagctccgccctctcaa
gaaagactccgagccctgttggctaaagacaacaagaacccaaagcccgaggagctgcgg
gacatcatcgagaaagctcgggagatggagcagagctgcggtcacctgttcgacgccatc
atcgtcaacacggaccaggacaaagcttacacagagctgctacgactcatcaacaaactg
gacactgaaccccagtgggtgccctgctcctggctgcgctga
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