KEGG   Scomber japonicus (chub mackerel): 128375133
Entry
128375133         CDS       T09718                                 
Symbol
pals1a
Name
(RefSeq) protein PALS1 isoform X1
  KO
K06091  MAGUK p55 subfamily member 5
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128375133 (pals1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sjo04990]
    128375133 (pals1a)
Domain-containing proteins not elsewhere classified [BR:sjo04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   128375133 (pals1a)
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ SH3_2 PDZ_6 SH3_1 L27 PDZ_2 SH3_9 MMR_HSR1
Other DBs
NCBI-GeneID: 128375133
NCBI-ProteinID: XP_053191378
LinkDB
Position
16:26049078..26071747
AA seq 673 aa
MTTSHLNGHVAGEGGGGGGGGGDEELRGGQQHREMAVDCPGELGSRTLPVRRSAQLERIR
QHQEDLRRRREEEGRQMDLNASLRLKKLSQNPHIGIDNPTFLQDSYSPQQPPLGSQHTHA
LLELEELLLSLKQVRGCLSDQQSQNDIELVLALLNKSDFQSALKIHNAVANSMHRPSPPY
PHTHQALQLAMEVRNVIQSSQNKEGLELHSLLTDTHIQSLLLAHDSIAEIEMEPEPLPTQ
GETLTQWGGETVKIVRIEKAQDIPLGATVRNEMDSVVISRIVRGGAAERSGLLSEGDEIL
EINGIEIRGKDVNQVFDILADMHGLLTFVLIPSTQSKPPPVKESVVHVKAHFDYDPSDDP
YVPCRELGLSFQKGDILHIISQADPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQT
IEEDKEPEKSGKLWCAKKNKRKRKKLLYNAHRNDDIDNEEILTYEEMALYHQPANRKRPI
ALIGPTSCGQAELRQRLLNNQLERFAGAVPHTTRSRRDGELSGRDYHFVSRQTFEAELSA
GKLIESGDFEKNLYGTSTDSVRQVINTGKICVLCLHTQALKVLRSSDLKPYIIFIAPPSQ
ERLRALLAKDNKNPKPEELRDIIEKAREMEQSCGHLFDAIIVNTDQDKAYTELLRLINKL
DTEPQWVPCSWLR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgacaacctcccatctgaacggccatgttgctggagagggaggaggaggaggaggagga
ggaggagatgaagagctgaggggaggacagcaacaccgggaaatggccgtagactgtccg
ggagagctggggagccggacgctgcccgtcagacggtccgcacagctggagaggatacga
cagcatcaggaggaccttcgtcgccgcagagaggaagagggtcggcagatggacctgaac
gcctcgctgcgactcaagaagctctcccagaatccccacatcggcatcgacaaccccaca
ttcctgcaggactcgtattcaccgcagcagccgccgctcggcagccagcacacacacgcg
ctgctggagttggaggagctgctgctgtcactgaagcaggtccgaggctgtctgtccgac
cagcagagtcagaatgacatagagctggttcttgcactactaaacaagtctgacttccag
tcagcgctgaagatccataatgccgtggccaacagcatgcaccggccctcccctccatac
ccacacacacaccaggcgctgcagctggcaatggaggtcaggaatgtcatccagtcaagt
caaaacaaagagggactcgaactccacagcctgctgacagacacacacatccagtcattg
cttctggcacatgacagcatagcagagatagaaatggagcctgaaccgctgcccacccag
ggagagacgctgacccagtggggaggagagactgtgaagatagttcgcatagagaaggcc
caggacataccactgggagcgactgttcgtaatgaaatggacagcgtcgtgatcagtcgt
atcgttcgaggcggagcagccgaacgtagcggacttttatcagaaggagacgaaatattg
gagataaacggcatagagatcagagggaaagatgtcaaccaagtctttgatattctcgcg
gacatgcacggcctcctgacctttgtgctcatccccagcactcagagcaaacctcctcct
gtcaaagagtctgtggtccatgtgaaggcacatttcgactacgacccctcagacgacccg
tacgtgccgtgcagagagctgggcctgtccttccagaaaggagacatcctccacatcatc
agccaggcagaccccaactggtggcaggcttacagggacggagacgaggataaccagcct
ctcgctggactggtaccagggaagagtttccagcagcagagagaagccatgaaacagacc
atagaagaagacaaggagcctgagaagtctgggaagctgtggtgtgcaaagaagaacaag
aggaagagaaagaagcttctgtacaacgctcacaggaacgatgatatcgataacgaggag
attctcacctatgaggagatggcgctgtaccaccaaccggccaataggaagcggcccatc
gcgctgatcgggccgaccagctgcggacaggcggagctcaggcaaagactgctcaacaac
cagctggaacgattcgccggagccgtgcctcacaccacacggagccgcagagatggagag
ctgagtggaagagactaccactttgtgtctcgtcagacgtttgaggcagagctgtcagct
gggaagctgatagagtctggagattttgagaagaacctgtacgggaccagtacagactct
gtgagacaggtcatcaacacgggcaaaatctgtgtgctctgtctacacacgcaggctcta
aaggtgctcaggagttcagacctgaaaccttacatcatcttcatagctccgccctctcaa
gaaagactccgagccctgttggctaaagacaacaagaacccaaagcccgaggagctgcgg
gacatcatcgagaaagctcgggagatggagcagagctgcggtcacctgttcgacgccatc
atcgtcaacacggaccaggacaaagcttacacagagctgctacgactcatcaacaaactg
gacactgaaccccagtgggtgccctgctcctggctgcgctga

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