Scomber japonicus (chub mackerel): 128375159
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Entry
128375159 CDS
T09718
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128375159 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
Tubby family proteins
128375159 (tulp4b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_ELP1_1st
WDR55
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
128375159
NCBI-ProteinID:
XP_053191409
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Position
16:9384846..9396525
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AA seq
1620 aa
AA seq
DB search
MLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDSTESDTDSDDSILP
LGKKSNFLPAHTTEVKPLLTVTFLSGDISLMNNYDDLSPAVIRSGLKDVEAQWCSQGDLL
AVAGMERHGLPVDSACGPIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLFL
ACGPALYVVRVEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLCSYVTTAFIPTIKPP
IPDPNNIRDFVSYPTAGNERLHCTMKRAEDSPEAGGPCYTLYLEYLGGLVPILKGRRISK
LRPEFVIMDPKTDSKAEEVCVNPMISYTDSCNCSDSSDIELSDEWVGKKSPKLSRGNRSP
KLQRMNMDSRKSPKLSHANQEGQRSPRLPTKKPPIRSPSLTRREFSMDGITEHNYLAQVT
SNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNP
NVFSEDEDDLPVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQ
LDVLTNPTATAAAAAAAAAASVPVSDHGQDAVATPYPVPARYPNPGQVIFNGLEMGPLLP
GTLPPPPPPHHLPPQPHPQRSHSQGDHGHMLKPSLPRTLPPSFSDADGSIEIQMRKVNPP
PPYPGTVVSAAAAAAAATAAATPQTLVTNCDSPSVLAPDPCLKKDEFLLHPVTLQYPTPL
GYERITTFDSSGNVEEVCRPRRRLIRNQNAYTVHGIGGSATLKVTSSDSKKIQLPYSSAT
LSRLSVPRYSIPSGDPPPYPDPANQVTTTLPPPQRIDNSLIHATIRRDRRDMGLKVPQMM
DSSRTLPTKAKMNSALALSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGTTSSGIAGGTV
VRQDFPPGKGAHHSTIIVHSKSTSPLASQSSYSLLSAVDNSRDRTVYVNSAFTEDETLNQ
QCHLEKSVRQLTLGDVSLTVKRPPPYQWDPSTTEEFWLTPEQTILGPPPGPHKPPLIISQ
AQHLDMTRLPFVLTTKPPSSPSTSTLTFPSGYQISLSPFPPGVGHSGPQLQTLQNPPPQC
SPNEVVGPVPFAQQDPNLVLPPGYPPNLANLACCPLPPMYPGASSCAGLQLHPVNLHPWN
PYPCPPPMQDPPAPPLPTKTHQILEKPILSPPPPTAPPPPPPLPPPPPPTELPPSKSATE
DLAESANNFAEPSSLNESPVPQESDRFNKKSRKRLDSRAEEANLPTVAEGKSRKEGRALS
DFNTLISSPRLGSREKKKPKGPREQLNKTKKMSRTTNEFQDSSESEPELFISGDELMNQN
QSSKKSWKNKRSLRMASELEEIKCRKANEREDRSLGSQGFVYVMANKQPLWNEATQVYQL
DFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVSLANVTQRLK
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgccgtggaacatggtcccatcctctgcagcgactccaacatcctctgcctc
tcatggaaaggccgggtccccaagagcgagaaggacaagccggtgtgccgcagacgctac
tatgaggagggctggctcgccacggggaatgggagaggagttgttggggtgacgtttaca
tctagtcactgcaggagggatagaagtacacctcagagaatcaattttaatctgcgtgga
cacaacagcgaggttgtcttggtgcgttggaatgaaccctttcagaagctcgccacatgt
gatatggaaggaggtatttttgtttggatccagtatgaaggaagatggtctgtggagtta
gtcaatgaccgaggagcccaggtgagtgactttacttggtcacatgatggcactcaagcc
ctcatcgcatacagggacggctttgtgttggttggctcggtcagcggacaaagacactgg
tcctcagagattaacctggagagtcaaatcacctgtggcatctggacaccagatgatcag
caggtcttatttggtacagcagatggtcaagtgatcgtgatggactgtcacggccggatg
cttgcccatgttctgctacacgagtctgatgggattgtgagtatgtcctggaactgccct
gatttcctggtcgaggacagcacagagagtgacacagactctgatgacagtattctgcct
ttaggtaaaaaaagtaatttccttcctgctcacacaactgaagtcaagcctttgttgaca
gtcaccttcttatcaggagacatcagtttaatgaacaactatgacgacctctctcctgcc
gtaattcgctcagggctgaaagatgttgaggctcagtggtgctcccagggcgacctcctg
gctgtggctggcatggagagacatgggctacctgtcgactctgcctgtggacccatcatg
aggaacgccctcgttaagttctataatgtccaaggagagcacatctacactttggaaaca
ccggcacagaggcccatcaccaccatctgttggggtcatagagactctcgtttgttcctt
gcatgtggaccagcgctgtatgtggtgcgtgtagagcacagggtggccagcctccaactc
ttatgccagcagggcatcgccagcgccctgcgagaagagaaagatgtggggaaactgaac
atgccctcgctgctctgctcttatgtgaccactgctttcatacccaccatcaagccccca
attcctgaccccaacaacatccgtgactttgtcagctatcccacagctgggaatgagagg
ctccactgcaccatgaagcgagcagaggacagccccgaggcaggcggtccctgctacaca
ctctacctagaatatttaggaggactggtacctattctcaaaggaagacgtattagtaaa
ctacgacctgagtttgtcattatggatccaaaaacagacagcaaagcagaggaagtgtgt
gtgaatcccatgatctcgtacactgacagctgtaactgctctgactccagtgacattgag
ttgagcgacgaatgggttgggaagaagtcaccgaagttgtcccgaggaaacaggtcacct
aaacttcaaagaatgaacatggattcaagaaaatctccaaaactttcacatgccaatcag
gaaggccaacgatcgccacggttaccgacaaagaagcctccaattcggtccccgagtctg
acacgtcgagagttttctatggatggaatcacagagcacaattaccttgctcaagtcaca
tccaacatctgggggacaaagttcaaaattgttggacttgcttctttcctccctgccaat
cttggtgcagtcatctataagaccagtttgcttcatttgcaaccgaggcagatgacaatt
taccttccagaagtgcgaaagatttcacatgacttcatgagcctaccagtgttcaatccc
aatgtattcagtgaggatgaggatgacttaccagtgatggggccatctggagtggcagga
gacaatcctccctgtacagtcaacatacctattgctcccatccacagcccagctcaggcc
atgtccccgactcagagtattggcctggttcagtctctattggccaatcagaatattcag
cttgatgtcctcaccaaccctacagccactgcagcagcagcagctgcagcagctgcagct
tctgtccctgtttctgatcacggccaggatgctgttgctacaccatacccagttccagct
agatacccaaatcctggtcaggtgatcttcaatgggctagagatgggtcctcttctgcct
ggtactttacctcccccacctccgcctcaccatcttccaccacagccacacccacagagg
tctcattcacagggagaccatggacacatgctgaagccaagtctgccccggactttacct
ccctccttcagtgacgcagatgggtctatagagattcagatgaggaaggtgaatcctcca
cctccataccctggcactgtagtgtctgcagcagcagccgcagccgcagctacagcggca
gctacgcctcaaacacttgtcacaaactgtgacagccctagtgtcctggcaccagacccc
tgtctgaagaaagacgagttcctgcttcacccagtgaccttgcagtacccaacacctctg
gggtatgaaaggatcacaacctttgacagcagtggcaacgtggaggaagtttgtcggcca
cgaaggcggctcattcgcaaccaaaatgcatacactgtccatggcatcgggggctcagcc
acactcaaagtcacttcatctgatagtaaaaaaattcagcttccgtacagctcagcaaca
ctgagtcgtctttctgtccctcgatactctatacctagtggggaccctcctccttaccct
gatccagcaaatcaggtaaccactacacttcctcctccacaaagaattgataatagtctg
attcatgccactatacgtcgtgaccgcagagatatgggactcaaagtgccacagatgatg
gatagctcaagaacccttcccactaaggctaagatgaacagtgcattagcactctcgtac
cagcagagggtgcccactgcattgtacacatgcacacagtgcagcagtaacagcagcagc
accagcgtcagtgtcagtggaggtggaactacgagtagtggcattgcaggtggcacggtg
gtgaggcaagacttccccccagggaaaggagcacatcacagtactattattgtgcactcc
aaaagtacctcacccctggcctcccagtcatcttacagtctgctgagtgctgttgataac
agccgggacagaacagtgtatgttaactctgcttttactgaagatgagactttgaatcag
cagtgtcacctcgaaaaatcagtacgccagctgactctcggtgatgtcagtttgacagtt
aaacgccctccgccttaccaatgggacccctccaccacagaggagttctggctcacacca
gagcaaaccatattaggtcccccaccaggacctcataaacctcctctcatcattagtcaa
gcccagcacttggacatgactcggctaccttttgtcctcacgactaaacctccatccagc
ccaagcacaagcactcttactttcccatcaggttaccagatatctctctcgccttttcct
ccaggtgtgggtcacagtggaccccaacttcagactttacagaaccctccaccacagtgc
tctccaaacgaagtggttggtccagtcccttttgctcagcaggaccccaatttggttctg
ccaccaggctaccccccaaatcttgctaacctggcttgctgccctctccctccgatgtat
ccaggagccagttcatgtgcaggacttcagctgcaccctgtaaacctgcacccctggaac
ccttacccctgcccacctcccatgcaagaccctccagcacctccccttcctactaagact
catcagattttagagaagccaattctctccccaccccctccaactgcaccacctccgcca
cctcctctgcctcctcctcctccacctaccgagctaccaccttccaaaagtgccacagag
gatcttgcagagtctgccaacaactttgcagagccatcatccttaaatgaaagccctgtg
ccacaggagtcagatcgcttcaacaagaagagccgcaaaagactggacagcagagctgag
gaggccaacttgcccactgtcgctgagggcaaatccagaaaggaaggccgtgcactctct
gacttcaacacactcatttccagcccaaggcttggcagcagagaaaagaagaagcccaag
gggccgagagagcagctcaacaaaaccaagaagatgagccggacaacaaatgagtttcag
gatagttccgagagtgagccggagctgttcattagcggcgatgaactcatgaaccagaac
cagagcagcaagaagagctggaagaacaaacgcagcctgcgtatggcaagtgagctggaa
gaaataaagtgccgcaaggcgaatgaaagagaggaccgtagtttgggcagccaagggttt
gtctatgttatggccaataaacaaccattatggaatgaagccacccaggtctaccagctt
gactttggaggaagagtcacccaggagtcagcgaagaattttcagattgagctggatggt
agacaggtgatgcagtttgggcgaattgatgggaatgcctatattttggatttccagtat
cctttttcagcagtgcaggcattcgctgtttccttggccaatgtgactcaaaggcttaag
tga
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