Scomber japonicus (chub mackerel): 128375193
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Entry
128375193 CDS
T09718
Symbol
rbm25a
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128375193 (rbm25a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128375193 (rbm25a)
Spliceosome [BR:
sjo03041
]
Complex A
U1 snRNP components
U1 related factors
128375193 (rbm25a)
Complex B
128375193 (rbm25a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
128375193
NCBI-ProteinID:
XP_053191452
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Position
16:complement(7567241..7579257)
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AA seq
825 aa
AA seq
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MSYPPPLNRQQIGIPQLPPRIPPPQYGGFAQAVPPGTPMIPVHMGVVTPTPTVLVPTTVT
VAQKPMAPKKEPGNIRAKDMEDSSGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRV
QGASGKLQAFGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLDEWKAKKKSA
NGGASSGSKNGDDDEEEVLDEETLRRDQVVKGAIDVLIREYASELNAPSQDPDSQPRNKK
RKEKKEEEDINAMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEKERLEIERERRERDK
ERERERERRDREKEKERERERDKERERDRDRDRERERDRERERTKERERERDRSRDVSED
RSRSRERTREEKKRDREEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKARDYSK
EMEREDERRREMMKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETELDERDRK
REKEELEEIRQRLLAEGHPDPDAELQRMEEEAERRRQPPLKLEPEEEVNQDKAHRDWDRE
KRGSGRPAEPAPRPPPQPHSDDDVEEGEEDDYHDGEDSQEAKPHLKPIMRPITTAPSVSS
ASGNATPNTPGNESPCGIIIPGENTPEVQPPEEHRPKIGLSLKLGATNSPSQLNVGKRKK
LASVESVFNKFDDEEADEQPRKRKLVPLDYGDDDKSLGLDGAEISGGKGSINTEEKRKHI
KSLIEKIPTARPELFSYPLDWTMVDSTLMDRRIRPWINKKIIEYIGEEEPTLVDFVCSKV
MAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccctcctccgctcaatcgccagcagattggcatcccgcagcttcccccgagg
atcccacctccccagtatggaggatttgcacaagcggtcccaccaggtactcctatgatc
ccggttcacatgggtgtagtgacccccacccccacagttcttgtcccgaccacagttact
gtagcacagaagccgatggctccgaagaaggagcctggcaacatccgagccaaggacatg
gaggacagcagtggccctaccacaactgtatttgtagggaacatctctgaaaaggcatct
gacatgttggtcagacaacttttagcgaaatgtggtattgttctaagctggaagagggtc
caaggagcctctgggaaactacaagcttttgggttctgtgagtataaagagcctgaatct
acactacgagccctcagacttctgcacgagttgctgttaggtgacaagaaactgttggtc
aaggttgatgctaagacaaaggcccaactagatgagtggaaggccaaaaagaagagtgcc
aatggtggagccagcagtgggtcaaagaacggggacgatgatgaggaggaggttcttgat
gaagaaaccctgcgtcgggatcaggttgtaaagggtgcaatagacgtcctcatcagagag
tacgcaagtgaactcaacgctccctcgcaggaccctgacagtcaacctcgcaacaaaaag
cggaaagagaagaaagaggaggaggatatcaatgccatggagatggaggatgacaagaga
gacttgatttccagagagatcagtaaattcagggacacgcacaagaaactggaagaggaa
aaaggaaagaaagaaaaggagcgactcgagatcgagagggaaaggagagagagggataaa
gagcgggagcgcgagagggagcgccgcgaccgtgagaaagagaaggagagggaaagggag
agggacaaggagcgggaaagagaccgagatcgcgacagggaaagggagagagaccgcgaa
cgggagaggacgaaggagagagagcgggagagggacaggagtcgagacgtcagcgaagac
cgcagcaggtcaagagagaggaccagagaggagaagaaacgcgaccgcgaagaagatgaa
gaagacgtgtatgaacggaggagacttgagaggaggctccgagacaaagaggctgcatac
caggagcgcctaaaaaactgggagatccgggagaggaagaaagctcgcgactacagcaaa
gaaatggagagggaagacgagcggcgtcgtgaaatgatgaaagaagccaaacgactgaaa
gaattccttgaagattatgacgacgacagagacgacccaaaatactacaggggaagcgct
ttgcagaagcgacttcgtgaccgagaaaaagaaacagaattggacgagcgagaccggaag
agagagaaggaagaactagaggagatcagacagaggcttctagctgagggccaccctgac
cctgacgctgagttacagaggatggaggaggaggcagagaggagacgacagccccctttg
aaacttgaaccagaggaggaggtaaaccaggacaaggctcacagggattgggatcgggag
aagagagggtcagggaggcccgcagagccagcgcctcgaccccccccgcagccacattca
gacgacgacgtagaggaaggggaggaggatgactaccatgatggggaggactctcaagag
gccaagccgcacctcaaacctatcatgcgaccaatcactaccgctccctcagtgtcctct
gccagtgggaacgccactccaaacacacccggcaacgaatctccctgcggcatcatcatt
ccaggcgagaacactcctgaggtccaacctcccgaggaacaccggcccaagatcggactc
agtctcaaactgggtgccacgaacagtcccagccagctcaacgttggaaagcgaaagaaa
ctggcgtccgtggaaagtgttttcaacaagtttgacgatgaggaggctgacgagcagcct
cgcaaaaggaaactggttccacttgactacggcgacgacgacaaaagtctgggcttggac
ggcgcagaaatttcagggggcaaaggcagcatcaacacagaggagaaacgcaagcacatt
aagagtcttatagagaagatccccactgccaggcctgagctcttctcctaccctctggac
tggactatggttgattcgactctgatggatcgccgcattagaccgtggattaataaaaag
attattgaatacatcggtgaagaggagccaactctggttgattttgtctgttcaaaggtg
atggcacacagcactccccaaggtattcttgatgatgttgctatggtactcgatgaagaa
gcagaagtcttcatagtaaaaatgtggaggctgttgatatatgaaacagaagctaagaag
attggactggtgaaataa
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