Scomber japonicus (chub mackerel): 128375194
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Entry
128375194 CDS
T09718
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128375194 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128375194 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
LRR_1
ig
Ig_2
LRR_9
C2-set_2
fn3
DHU1_N
C2-set_3
Ig_DSCAM-DSCAML_C
Rop
Motif
Other DBs
NCBI-GeneID:
128375194
NCBI-ProteinID:
XP_053191455
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Position
16:complement(22510016..22532462)
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AA seq
877 aa
AA seq
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MERLLLCVMLAVAIAVRAQSCPKRCVCQILSPNLATLCAKKGLLFVPTNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFTDLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVMIHQGAFNDLLALEELDLSYNNLDSIPWEAIQKMISLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTSSSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQQLSGRYFWSIPEEEFLCEPPLITRYSHEMRVL
EGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHITNNTNNIQEPDPGSSDISTSTRGGANGNNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRTIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFSTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSMSMTNVHSQTNGQQSQGCTVTPSASKHGSIGLE
DHSGGSKKRGGGAGGGGKDSITQSSDSSLPDCSTTTSVLSQPWSARSPTGGAEEKAGEER
GSLAAERAQAGISSPTATGTLTKPKRKPAPNKPGSACSNTSANPENLASSSPRPPTSSST
ASSALLPSSIPLENLNTNRNNSTSLNQTPPPPFSPSCFSSPYATPSPVPSVQFRETPILR
RAPRTTTISSSSSAVKYQTLPVEEGGRSRARRRYSLSEGGSTKTHLPHQGGGGAPKLGRI
MRNKRSQSMSGMLLPKEEDGDTDKGRCDSDWILESTV
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactgttgctgtgtgtgatgctggcagttgccatagcagtacgggcacagagc
tgtccgaagcgctgtgtatgtcagatcctgtcacccaacctggcaaccctctgtgccaag
aaaggtctactgtttgtaccaacaaacattgataggcatacagtggagctacggctggct
gacaactttgtcacgagtgtgaagagaaaagattttgcaaacatgacacgactggtggac
ctaacattatccagaaacaccatctcctacatcacacctcatgccttcaccgatctggag
aacctcagagctctacacctcaacagtaaccggctgacgaggataggcaatgatacattc
agcgggatgtcgaagctccaccacctgattctgaacaacaaccagctggtaatgatccac
cagggagcattcaatgacctgctggcactggaagaattggacctcagttacaacaacttg
gactcaattccttgggaggccatccagaaaatgatcagcctccatacgttgagtttagac
cacaacatgttggactttattccagagggaaccttttccctgctgcagaagctcaaccgg
ctggacgtaacctccaataaactccaaaagttgccgccagatcctctttttcaacgagca
caggttctggccacatcagggatcatgacctcctcatcttttgcgctgtcattcggtgga
aaccctctccactgtaactgtgagttactctggctgcgaaggctgaacagagaggatgac
ttggagacgtgcgcctcgccccagcagctctctggacgctacttctggtccattcctgag
gaggagttcctctgtgaacccccgctcatcaccagatactcccatgagatgagggtcctc
gaaggccagagagttgcactcaggtgcaaggcaaggggtgatccagagccagccatccac
tggatctctcctgagggcaaactggtatcgaactcctccagaacattggtctacaccaac
ggtactctggacatcctcatcagtactgtgaaagataccggctccttcacctgtatctcc
tccaaccctgctggtgaagcccaccaaactgtagacctggttattattaaactcccgcat
atcaccaacaacaccaacaacatccaggagcctgatccaggatcatcagacatttccacg
tcaacccgtggtggggccaacgggaacaacgtgacgggcgacgtgaagggtggggtggat
aagagggtggtgacggctgaggccacgtcctcgacggcactaatcaagttcaacttccag
aggactattccgggcattcgcatgttccagatacagtacaacgggagccaggatgactca
cttgtgtacagaatgatccccccatcaagcaagaacttcttggtcaacaacctagcagca
gggacccagtacgacctctgcgtgctggccatctatgacgatgtcattacctcgctgaca
gcaacccgtgtggtcggctgtgtgcagttcagcactgagtcagagtacatgaggtgtcat
tttatgcagtctcagttcctcggtgggactatgatcatcatcatcggagggataatagtg
gcctctgtgctcgtgttcatcatcatcctgatgatacggtacaaggtgtgtaaccctggt
gagggaggtaaaggcgtttcaatgtcgatgaccaacgttcactcacagaccaatgggcag
cagtcacagggatgcactgtgactcctagcgcctctaaacatggctcaatcggattagaa
gaccactcaggtggctcaaagaagagaggcggaggagcaggaggagggggcaaggattcg
attactcagtcgtccgactcttccctgcctgactgctccacaaccacatcggtactcagt
cagccttggtcagccagaagcccgacaggtggagccgaggagaaagcgggtgaagaaagg
gggtctttggcagcggagagagctcaagctggcatctcgtcacccaccgccaccggtacg
ctgaccaagccaaagcgcaaacctgctcccaataagccaggctcggcttgctccaacacc
tcggccaaccctgaaaatctcgcctcctcctcccctcgccctccaacctcctcctccacc
gcctcttctgctctcctcccttcttcaatccctctggagaacctcaacaccaaccgcaac
aactccacctctcttaaccaaaccccccctcctcctttcagcccatcctgtttctccagc
ccttatgccaccccgagccctgtgccctccgtccaattcagagagacgcccatcctgcgc
cgagcacctcgcaccaccaccatctcctcctcctcctctgctgtcaagtaccagactctc
ccagtggaggagggagggagaagtagggcgaggaggaggtactcccttagtgaaggaggc
tcaacaaagactcacttgccccatcaaggaggaggcggagcacccaaattagggcgcata
atgcgaaacaaaaggagccaatcaatgagcgggatgctactccccaaagaggaggatgga
gacacggacaaagggcggtgtgactctgattggatcttagaaagcacggtttaa
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