Scomber japonicus (chub mackerel): 128375199
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Entry
128375199 CDS
T09718
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128375199
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128375199
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375199
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128375199
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128375199
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Others
128375199
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
128375199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ANCHR-like_BBOX
GBP
AIG1
MMR_HSR1
zf-B_box
Msb1-Mug8_dom
Motif
Other DBs
NCBI-GeneID:
128375199
NCBI-ProteinID:
XP_053191459
LinkDB
All DBs
Position
16:18454838..18462044
Genome browser
AA seq
786 aa
AA seq
DB search
MSGHGSSSEKGVNTSLICQESYACGGSEEAAFECYECKSLQCVRCELELHNQESLKNHER
VQISPGHVPYCDNCKGGNGDSGKRHRSVVRCQNCKVNLCQDCQKRTHSGGNRKKHQLTSY
PPPPKPAEVSSVQTPVQPVVQVGDETKSQRAKLLEKITSFLLVDENEEMQIKDDAAFVKR
LNCPPDQLLKVVSIFGNTGEGKSHTLNHTFFMGREVFKTSPTQESCTVGVWAAFDPIHKV
VVIDTEGLLGNSSKQGQRTRLLLKVLAISDLIIYRTHADRLHDDLFKFLGDASEAYLKHF
TKELKATTARCGLDVPLSTLGPAVVIFHETVHTKLLGSDKSSESVDRLLLERFRKLSRFP
EAFSSVQYWGTQTLSPPTDFRGLQSKLEQLLDNNATRSPRTPVVIFKALQALSERFNGEI
GDELVAHSCFFPDEYFTCSSLCLSCGSGCKNSMNHLAEGVCHEARHRCRYSVQYDNRIYT
CKACYEGGKEVLVVPKTSASSDSPWMGLAKYAWSGYVIECPNCGVIYRSRQYWYGNQDPV
DTVVRTEIQHVWPGSDGFLKDNSNAAQRLLDGVNLVAQSVSELSVKPAKAVTSWLTDQIA
PAYWKPNSLILVCHKCHEVFQDNDTKHHCRACGEGFCDGCSSKAAPVPERGWGLAPVRVC
DICFEQRASYAEILEAELEEEEGGTLARKVGEAVTNTIGVVVTAIDIPLGLVKDAARPAY
WVPDQDILSCHNCQREFTAKLSKHHCRACGQGVCDDCSPERRPVPSRGWDHPVRVCTSCN
QKPGEL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccatggctcatcttcagaaaagggagtcaatactagtctaatatgtcaagag
agttatgcctgtggtggctctgaggaagctgcatttgagtgttatgaatgcaaaagcttg
cagtgtgttcgttgcgagcttgagctccacaaccaggagtctctcaagaaccatgaacgg
gttcagataagtccagggcatgtcccttactgtgacaactgtaaaggaggtaatggagac
agtggcaaacgccataggtctgtggtccgctgccagaactgcaaagttaatttgtgccaa
gactgtcagaaacgcacccacagtggaggcaacaggaagaaacaccagcttacatcttat
cctccaccaccaaaacctgccgaggtcagctctgtccaaacacctgtgcagcccgttgtc
caagtaggcgatgagaccaaatctcagcgagcaaagctcctggagaagataaccagtttt
ctactggttgatgagaatgaggaaatgcagataaaagatgatgctgcatttgtaaagagg
ttgaactgcccccctgaccagctgctgaaggtggtgtccatctttggtaacacgggagag
ggcaaatctcacaccctgaaccatacattcttcatgggcagagaagtgttcaagacctct
cccacacaggagtcctgcacagtgggtgtgtgggcagcgtttgatcctatccataaagta
gtggtcatcgatacagagggtctgcttgggaacagttccaaacagggccagagaacccgt
ctcttgctcaaggtgctcgccatctctgacctcatcatctaccgcacccatgctgaccgt
ctccacgacgacctcttcaaattcctcggggacgcctctgaggcctacttgaagcatttc
actaaggaactgaaggccacaacagcccgctgtggcctggatgtcccactgtccaccttg
gggcccgctgtggtcatcttccatgagacagtccacactaagttgctcggttcagataag
tcgtccgagtcagtagatcggctgctgttggaacgcttcaggaagctttctcgtttccca
gaggccttcagctctgtccagtactggggcacacagactctgagcccccctactgacttc
cgtggcctgcagagtaaactggagcagctccttgataacaatgccacccgttccccacgc
acccctgtggtcatcttcaaagccctgcaggcattaagtgagcgcttcaatggagaaatt
ggagatgagctggtagctcacagctgcttttttcctgatgagtacttcacttgctccagc
ttgtgcctcagttgtggatctggttgcaagaacagcatgaaccacctagcagaaggagtg
tgccatgaggcaaggcatcgttgtcgttattctgttcagtacgataatcgtatttacacc
tgtaaggcttgctatgaaggggggaaggaagtgctagttgtcccaaagacctcagcatct
tcagactctccatggatgggtcttgccaaatatgcctggtctgggtatgttattgaatgt
cccaactgtggagtgatctatcggagccgtcagtattggtatgggaaccaggacccggtg
gatacagttgtccgcactgagatccagcatgtatggccagggtcggatggctttttaaag
gacaatagcaatgcagcgcagcgtcttttggatggagtgaacttggtagcccagtctgtg
tcagagctcagtgtcaagcctgccaaggctgtcacctcttggctgacagatcagatcgcc
ccagcctactggaaacccaactccctcatcttggtgtgccataagtgtcatgaagtcttc
caggacaatgacaccaagcatcactgccgtgcctgtggagagggtttctgtgatggctgc
tcttccaaagctgcaccagtccctgaaagaggctggggtcttgcccctgtcagagtctgt
gatatctgctttgagcagagagcttcatatgcagagattcttgaggcagagcttgaggag
gaagaaggcggaacgctcgccaggaaggtcggagaggcagtgaccaacaccataggggtt
gtagtcactgctattgacatcccacttggtctagtgaaagacgcagcccgtcctgcctat
tgggtgcctgatcaggacatcctgtcctgccacaactgccagcgtgagttcactgccaaa
ctgtccaagcatcactgccgtgcctgtggccaaggagtgtgtgatgactgctccccagag
cgtcggccggttccatcgcggggctgggaccaccccgtgcgtgtgtgcaccagctgcaac
cagaaacctggagaactttaa
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