Scomber japonicus (chub mackerel): 128375230
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Entry
128375230 CDS
T09718
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00330
Arginine and proline metabolism
sjo00480
Glutathione metabolism
sjo01100
Metabolic pathways
sjo04148
Efferocytosis
Module
sjo_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
128375230 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
128375230 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128375230 (odc1)
Enzymes [BR:
sjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
128375230 (odc1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
128375230
NCBI-ProteinID:
XP_053191499
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All DBs
Position
16:complement(25010812..25016221)
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AA seq
458 aa
AA seq
DB search
MNTPTEFDFSFLEEGFSARDIVEQTINESSMTDDRDAFYVCDLGDVLKKHLRWVRALPRV
SPFYAVKCNDSRAVVMTLASLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQIKY
ASAHGVQMMTFDSEVELMKVARYHDNAKLVLRIATDDSKAVCRLSVKFGAPLKACRGLLE
RAKELGLDVIGVSFHVGSGCTDPETYMQAITDARCVFDMGDELGFNMDLLDIGGGFPGSD
DAELKFEEITAVINPALDKYFPADCGVRIIAEPGRFYVASAYTLVVNIIAKKVIIDDESA
SDEEDEGTNDRTLMYYVNDGVYGSFNCILYDHAHCLPTLHKKPKPDEVMYPCSIWGPTCD
GLDRIVEQCSLPDMQVGDWLVFENMGAYTVAASSTFNGFQRPDMHYVMSRPAWQQVQQIC
SQGLPAPAEESCLFEVPACCGRESNLEMPTKPCQAHVV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcccaccgagtttgatttctctttcctggaggagggtttctctgctcgggat
attgtcgagcagacgattaatgagtcatccatgacggatgacagagatgccttctacgtc
tgcgacttgggcgacgtgttaaagaagcacctgcgctgggtgagggcactgccccgtgtc
tctcctttctacgctgtcaaatgcaacgacagccgggctgtggttatgactctggcatcc
ctgggaactggctttgactgtgccagcaagacggagattcagctggttcagtctctgggt
gtggatccaagcagaatcatctatgccaacccctgcaagcaggtttctcagatcaagtat
gcgtctgcccatggtgtccagatgatgacttttgatagcgaggtggaactgatgaaagtg
gcccgctatcatgacaacgccaagttggtactgcgcattgccacagatgactcaaaggca
gtgtgtcgcctcagcgtgaagtttggggcgccactcaaagcttgtcggggtctcctcgag
cgggccaaggaactgggtctggatgtgattggtgtgagcttccatgtcggcagcggctgc
actgacccagagacctacatgcaggctatcactgatgcccgctgcgtcttcgatatgggg
gatgagctgggcttcaacatggacctgttggacatcggaggtggtttccccggctcagac
gatgctgaactcaaatttgaagagatcacagccgttatcaatccagccctggacaagtat
ttccctgctgactgtggtgtgaggatcattgctgagccagggcgcttctacgtggcttct
gcttacactctggtggtcaacatcattgccaagaaggtcatcatagacgatgaatcagcc
tctgatgaggaagatgaagggaccaatgataggaccctgatgtactacgtcaacgatgga
gtgtacggatccttcaactgtatactttatgaccacgctcactgtctgccaacattgcat
aagaagccaaagccagatgaggtcatgtacccctgcagtatctggggcccaacatgcgac
ggccttgatcgtattgtcgagcagtgcagcctgccggacatgcaggtgggcgactggctg
gttttcgagaacatgggcgcctacactgtggccgcctcctccaccttcaacggctttcag
agaccagacatgcattacgtcatgtcccgccccgcctggcaacaagtgcagcagatctgt
tcccagggcctgccagctcctgcggaggagtcctgcctgtttgaagtgccagcctgctgt
ggcagagagagcaacttggagatgcccactaagccctgccaggcccatgtggtttaa
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