Scomber japonicus (chub mackerel): 128375233
Help
Entry
128375233 CDS
T09718
Symbol
ttll5
Name
(RefSeq) tubulin polyglutamylase TTLL5
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128375233 (ttll5)
04812 Cytoskeleton proteins [BR:
sjo04812
]
128375233 (ttll5)
Enzymes [BR:
sjo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
128375233 (ttll5)
Cilium and associated proteins [BR:
sjo03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
128375233 (ttll5)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
128375233 (ttll5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
128375233
NCBI-ProteinID:
XP_053191501
LinkDB
All DBs
Position
16:17892695..17945989
Genome browser
AA seq
1305 aa
AA seq
DB search
MPVVIRDKEDSESSSEDEQEDHPCITWSGLSKTIPVLLFVPEAIVSKDGNICSIGERYNM
AFKIVRTESRLVRGILTNHGFHEVHPNSNDFNLMWTGSHLKPYILRSLQDFQRVNHFPRS
YELTRKDRLYKNIQRMQQTHGFKNFHIVPQTFVLPSEYQEFCNYFAKDKGPWIIKPVASS
RGRGIYLVSNPNQISMDENILVSRYINNPLVIDEFKFDVRLYVLVTSYDPLIVYVYEEGL
ARFATVKYDRTSKNIKNTFMHLTNYSVNKKSSDYVSCDDPEVEDYGNKWSMSAVLRYLKQ
EGKDTTLLMRQVEDLIIKAVLSAEQQIANACKMFVPHKTNCFELYGFDVLIDTNLKPWLL
EVNLSPSLACDAPLDLKIKASMIADMFSLVGFVCQDPLSRQSRSDRVTLDPSLKPQAQRT
QKPFSAPTATARSRVRQRPASASNAETDGLKDRQGAKQGQGDSTLSLTAEEIKVLRRIKE
EYERRGGFIRIFPTAETWELYGGYLESKTSMNYMLANRLFHGRNVNGNVQLQVDTVHGYH
VVQYERKLLSLEARKRRQRHLTHRSAAGKKKSGKESKASLTESSGLEGEECAQEEGEEVK
QVCEPVSHKALVAEQRKQVATSLESSHSETLSSSEAARPRVNLLNILQQGWDLSKVQARM
AFSSYLQRVQQRLLAESSANTIPAWPEKDNDQMELVIRFLRRAASNLQQDIKVVLPSRQL
PLQDRRRILSHQLGEFIHCYNKETEHMLKKQENSKEELCVDASVFQEYITAASENDLEEV
LTFYTQKNKSATVFLGTKVRSVKKDFHEINASGEPGNCEKSKTLPVAKEDSSSSESSLST
GKISSDPDIKATESQPSVRMLPEDPQAAVRAAKTRPEVQASQHCSSFPVTLDCTHIHLQH
CSPAPTSLPLHCPPPPPPSQPPSYAQSLAKSQFCQSETLSDLPAYTSAPVVTQPQRAMWT
AVSTGLNTAGIGQSTQVLKGIPSFTSSTPSSAASSMPSATHIYSQKLSRPTSAGQVIRRS
SSSKLKSNSAGTFKELNSLSAQAQSNQQAFISALQKLADKQVARHYASSSNINLLTQHLT
NLNLANRMLGTESFTLNNKVRHTAATTQGPMKALHSGTDLLSSTGHRSLHDEESLWDGQV
QNAYSLVTGVNPQQRYMPTQGSYQLQFAIQQLQQQRRQSQQLSDQRRCRHQGQHSDQTSV
PPAQAPTNPSSCPPSSLYVRPNHSQSHSHIQTCVKPVLAPKPPSSAREGQIRKTATKRLI
KQTSMESSASGTVSSDQHMVYEAICGKTGLSVYRKLFQAQEPGQR
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgtgatccgggataaggaggactctgaatcctcctctgaggatgagcaagaa
gaccatccctgcattacctggagtggccttagcaagaccatcccagtcctcttgtttgtc
cctgaagctattgtctcaaaagatgggaatatctgctctatcggagagcgatacaacatg
gccttcaagattgtacgcacagagagccgcctggtacgaggaatactgaccaatcatggg
ttccatgaggtccacccaaatagtaatgactttaacctcatgtggacaggatctcacctc
aagccttacatactgcgtagccttcaagatttccagagggtcaaccattttcccaggtca
tatgaattgacgcgcaaagaccgtctctataaaaacatccagagaatgcagcagacccac
ggcttcaaaaacttccacatcgttcctcagacttttgtcctcccctctgagtaccaggaa
ttctgcaattatttcgccaaggacaagggcccatggattattaaaccagtagcatcttca
agaggacgaggcatctacttggtcagcaatccaaatcagatttcaatggatgagaacatc
ttggtatctcgctatattaataatccactagtgatagacgagttcaagtttgacgtgcgg
ttgtacgtgttggtaacgtcatacgatccgctcatcgtctacgtgtatgaggaaggtctg
gccagatttgctacagtcaagtatgaccggacttcaaagaacattaagaacacctttatg
catctcactaactacagcgtgaacaaaaagagcagcgattatgtcagttgcgatgaccct
gaagttgaggattatgggaacaagtggagtatgagtgcagtgttgaggtatttgaagcag
gaggggaaggacaccacattgttgatgaggcaggtggaggacctcatcatcaaagctgtg
ctgagtgccgaacaacagatagccaacgcctgcaagatgttcgttccccacaagacaaac
tgctttgaattgtatggttttgacgtgctcattgacaccaacctcaaaccctggttgttg
gaggtgaatctttctccctccttggcctgtgatgcacccttggatctgaagataaaggcc
agcatgattgcagacatgttctcgcttgtgggctttgtgtgtcaggaccccctgtcgagg
cagtcgcgctctgaccgagtcaccctcgaccccagcctcaaaccccaggctcagagaaca
cagaaacctttttctgcaccgacagccaccgctcgcagcagagtgcggcagaggcctgca
tcagccagtaacgcagagacagacgggttgaaagacaggcaaggagccaaacaaggccaa
ggagacagcactttaagtttgactgctgaagagatcaaagtgcttaggaggataaaggag
gagtatgagagacgagggggcttcattagaatcttccccacagcagagacatgggagctt
tatggtggatatctggagtccaagacatcaatgaactacatgttggcaaacagacttttc
catggaaggaatgtgaacgggaatgtgcagctgcaggtggacacagtccacggctatcac
gtcgtccagtatgagaggaagctgctgtctctggaggcacgtaagaggagacagcgccac
ctgactcatcgctctgctgcagggaagaagaaatcgggtaaggaatccaaggcctctctg
actgagagcagtggtctggagggagaggagtgtgctcaggaggaaggagaggaggtgaaa
caagtttgtgaaccggtctcacacaaggctttggtagcagagcaaagaaaacaagtggcc
acatcactggagagctctcacagtgagactctgtccagctcggaggcagccaggcccaga
gtcaacctgctcaacatccttcagcaggggtgggacctcagtaaagtgcaggcccggatg
gctttttcctcttacctgcagcgagtccagcagagactgttggcagagagtagtgccaac
accatcccagcttggccagaaaaggacaatgaccaaatggagctggtgattcgttttttg
agaagagcagccagtaaccttcaacaagacataaaggtggtcctgcccagtcgccagcta
ccactccaagaccgcagacgcatcctgtcccaccagctaggggagtttatccactgttac
aacaaggaaaccgaacatatgctgaaaaaacaggagaatagcaaagaggagctttgtgtg
gacgccagtgtatttcaagagtacatcactgcagcgagtgaaaatgatctggaggaagta
ctgacattctacacacagaaaaataaatcagccaccgtcttcctaggaacaaaagtcagg
agtgttaagaaagactttcatgaaataaatgcctcaggagagccaggcaactgtgagaaa
tccaaaactctgcctgtggccaaagaggattccagctcttcagaatcctcgctatccaca
gggaaaatcagcagtgacccagacatcaaggccactgaaagtcagccttctgtccgtatg
ttgcctgaagacccacaggcagcagttagagctgctaaaacccggccagaggtgcaggcc
tctcagcactgttccagctttcctgtgaccctggattgcacccatattcatctgcagcac
tgctcccccgccccaacatccttgcctcttcactgtccaccaccgccaccgccatctcag
ccaccgtcctacgcgcaatccttggcgaaatctcagttctgccagtccgagactctctct
gaccttcctgcatacacctccgctcctgtggtcacgcagccccaaagagcgatgtggaca
gctgtttctactggccttaacacagcgggtatagggcaatcaacccaggtgctcaaaggg
atcccatcctttacctcatccacgcccagctctgcagcctcctccatgccaagtgccaca
cacatctatagccagaagctctctagacccacctctgcaggccaggtgatcagaaggagc
agttccagtaagctgaagtcaaactcagcggggaccttcaaggagttgaactctttgtct
gcccaggcccagtcgaaccagcaggctttcatctcggccctccaaaagctggccgacaag
caggttgctcgccattatgccagctccagtaacatcaacctgctgacacaacacttgaca
aacctgaacctggccaataggatgctgggcacagagagcttcacactgaacaacaaggtg
cgacacactgctgctacgacccaaggaccaatgaaagctcttcactctggaacagatcta
ctgagcagcaccggccacaggtcgttgcacgatgaggagagtctttgggacgggcaggtg
cagaatgcctacagcttggtgacaggggtgaacccacagcagcgctacatgcccacccag
ggaagctaccagcttcagttcgctatccagcaactgcaacagcagagacgtcaatcacaa
caattgtcagaccagagacgttgcagacaccagggtcaacattcagaccagacaagcgtt
ccacccgcccaggctcccaccaacccatccagctgccctccatccagcctttatgttcga
cccaatcacagtcaaagccacagccacatccagacctgtgttaaacctgttcttgctcca
aagccacccagcagtgcccgagagggccagatcaggaaaacagcaacaaagcgcctcatc
aagcagacgtccatggagagttcagccagtggaaccgtgtccagcgaccagcatatggtc
tacgaggccatctgcggtaaaacaggtctttctgtgtaccgcaagctgttccaggcccag
gagcctggtcagagatga
DBGET
integrated database retrieval system
