Scomber japonicus (chub mackerel): 128375287
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Entry
128375287 CDS
T09718
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128375287 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128375287 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128375287 (tra2b)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128375287 (tra2b)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
SR proteins
128375287 (tra2b)
BRITE hierarchy
Motif
Pfam:
RRM_1
RRM_occluded
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
128375287
NCBI-ProteinID:
XP_053191568
LinkDB
All DBs
Position
16:11598842..11605094
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AA seq
279 aa
AA seq
DB search
MSDNEKDFREQDSRPGSRSASPRGSVKSTSRSPARSKDGSRRSRSRSRSRSRSKSKSRSR
SHRSSRRHYSRSRSRSHRRRSRSRSRSWEYRRRRSHSRSPMSNRRRHIGNRANPDPNTCL
GVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENYEDSKEAKERAN
GMELDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGSSRRVSRDYDRGYERGYDRGYERD
YDRYEDREYRSYRRRSPSPYYSRGYRSRSRSRSYSPRHY
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgagaaagatttcagggagcaggactcaaggcctggctcgaggagcgcc
tcccctcggggctcggtgaaatccactagccgctcgccggcacgctccaaagatggttcc
cgccgttccaggtctagatctcgttctcggtccaggtccaaatccaaatccaggtcccgt
tcccatcgaagctcgcgcaggcactactcgcgctctcgctcccgctcccatcgacgccgt
tccaggagccgatctcgtagctgggagtaccgccggcgtaggagccacagccggtccccc
atgtcgaaccgccgcagacacattggcaacagggccaaccccgaccccaacacctgcctc
ggtgtgtttgggctgagtctgtacaccactgagagggatctgagggaggttttctctaaa
tacggccctttggctgacgtcaacattgtatacgaccagcagtcgcgccggtcaagaggc
tttgctttcgtctattttgaaaattacgaggactccaaggaggccaaggagcgcgctaac
gggatggagctcgacggacgcaggattcgagtggatttctctatcaccaaacgggcccac
accccgactcctgggatctacatgggacgacccacatacggcggcggttcatcgcggcgt
gtctcgagggactacgacaggggctacgaaagaggctacgacagaggttacgaacgtgac
tatgatcggtatgaagaccgggagtaccgatcatacagacgcagatccccatctccttac
tacagcagaggataccgctctcgatcacgatcacgatcctactcaccacgtcactactga
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