Scomber japonicus (chub mackerel): 128375296
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Entry
128375296 CDS
T09718
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03022
Basal transcription factors
sjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128375296 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
128375296 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128375296 (mnat1)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128375296 (mnat1)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128375296 (mnat1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128375296 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
128375296
NCBI-ProteinID:
XP_053191583
LinkDB
All DBs
Position
16:complement(16604489..16638642)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVDIRKKVLKIYNKRDFDFPSLRDYNDYLEEVEDIVYNLTNNIEVEDTKQ
RMEQYQRENRDLIQKNKAKLTREQEELEELLLLEQQGNEQRRLDLLQEEQRQLQAKRKSK
QALLDELEQSQLPATILLAQHKVRAAQLETQIEQQKQAVKPTTLFSTGINLRQTVSLQAV
PKIQEALYHYQPLQVDTYGPAVPELEQLGRLGYLNHVRAAMPQDTAGGYSSALACHRAVQ
DAFSGLFLWKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaagggtgtccgagatgcaaaaccacgaaatacagaaacccgtccctgaag
ctgatggtgaacgtctgcggacacacgctatgtgagaactgcgtggagatgctgtttgtc
cgcggctcgggcaactgcgtccagtgtgacacgcctctgaggaagagcaacttccgcgtg
cagctcttcgaagaccccactgtagataaagaggtggatattcgcaagaaggtgctgaag
atatacaacaagagagattttgacttcccgagcctgagagactacaacgactatctggaa
gaagtggaggatatagtgtataacctgacaaacaacatcgaggtggaagacaccaaacag
aggatggagcagtaccagagggagaaccgagatctcatccagaagaataaggctaagctt
acacgagagcaggaggagttggaggagctgctgttgctggagcagcagggcaatgagcag
cggaggctggatttgctgcaggaggagcagaggcagctacaggccaagaggaagagcaag
caggctctgctggatgaactggagcagtctcaacttccggccaccatcttgcttgcccaa
cataaggtccgtgctgcccagctggagacacagatagagcaacagaagcaggcggtcaaa
cctaccaccctgttttcaactggaatcaacctgcgtcagaccgtatctctacaggctgtg
cccaagatacaggaagcactttaccactaccagccccttcaagttgacacctatggacct
gcggtgcctgaattagagcagctgggcagacttgggtatttgaaccatgtgcgggctgcc
atgcctcaggacacagctggaggatacagctcagctttggcgtgtcatcgagccgtccag
gatgctttcagtgggctgttcctctggaaaggttga
DBGET
integrated database retrieval system
