Scomber japonicus (chub mackerel): 128375477
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Entry
128375477 CDS
T09718
Symbol
gabra2a
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128375477 (gabra2a)
04082 Neuroactive ligand signaling
128375477 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128375477 (gabra2a)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128375477 (gabra2a)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128375477
NCBI-ProteinID:
XP_053191812
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All DBs
Position
16:31150155..31223598
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AA seq
453 aa
AA seq
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MSGRWGSHHMSVLVSLMVLWQTWXVLYLYANSTSTFKDITTFTKILDSLLDGYDNRLRPG
LGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWKDERLKFHGPMNILPLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSHSC
PLKFGSYAYTKTEVTYIWTRNASKSVDVADDGSRLNQYDLVGQTVGKETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKKKEASIM
KKNNAYAVAVANYAPNITKDSTLPTISKCALSDPNKTSGEIKPEQNKKTFNSVSKIDRIS
RIMFPVLFGSFNLVYWATYLNREPVIKDMDPSK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacgatggggctcacatcacatgtctgtgttggtctctttgatggtattgtgg
cagacatggtaagtgttatatctgtatgccaattctacaagcaccttcaaagatattaca
acattcaccaagatcctggacagtctgctggatggatatgacaacaggctgagaccaggt
ctgggagacagagtgacggaagtcaagactgacatctatgtgaccagtttcggtccagtg
tctgacacagacatggagtacactgtggatgttttcttccggcagagttggaaggacgag
cgattaaaattccatggtccaatgaacattctgcctcttaacaacctcatggccagtaaa
atctggacccctgacaccttcttccataatggcaagaagtctgtggcacacaacatgacc
atgccaaacaaactgctgaggatcatggaggatggaaccttgctctacaccatgaggcta
acggttcaagctgagtgtcccatgcacctggaagacttccctatggactctcactcatgt
cctctcaagtttggcagctatgcctacactaagacagaggttacttacatctggactcgt
aatgcttccaagtctgtggatgtggcagatgatggatccagactcaaccagtacgacttg
gtgggccaaactgtggggaaggagaccattaaatccagtactggtgaatatacagtcatg
acagcccacttccacctgaagagaaagattggctactttgtgatacagacgtatctgccc
tgtatcatgacggtcatcctctctcaggtctccttctggctcaacagagagtctgtgcca
gccaggacagtctttggtgtaactacagtactcacaatgaccactctgagtattagcgcc
cgtaattccctgcccaaagtggcctatgctacagctatggactggttcatcgctgtctgc
tatgcctttgtcttctctgcgctcattgaatttgccaccgtcaactacttcaccaagcga
ggctgggcctgggatggaaagagtgtcgtcagtgagaagaaaaaggaagcatccatcatg
aagaagaacaatgcgtatgctgtggctgtggctaactacgcacccaacatcactaaagac
tctacgctgcccacgatctccaagtgtgctctaagtgatcccaacaagacgagcggtgag
atcaaacctgagcagaacaagaaaaccttcaacagtgtcagcaagatcgaccgaatctcc
cgcatcatgttccctgtgctgtttggaagctttaacctcgtctactgggccacctacctg
aacagagaaccagtcattaaagatatggatccttccaaatga
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