Scomber japonicus (chub mackerel): 128375478
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Entry
128375478 CDS
T09718
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
sjo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128375478 (gabrg1)
04082 Neuroactive ligand signaling
128375478 (gabrg1)
04519 Cadherin signaling
128375478 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128375478 (gabrg1)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128375478 (gabrg1)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
KAT3
Motif
Other DBs
NCBI-GeneID:
128375478
NCBI-ProteinID:
XP_053191814
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All DBs
Position
16:31239539..31256632
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AA seq
386 aa
AA seq
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MSSVVSVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSN
MVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMD
EHSCPLEFSSYGYPKNEIMYRWQRRAVEVADQRYWRLYQFAFVGLRNTSDVAHTQSGEYV
ILTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLST
ISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQTKKSKANNNTQKAPMV
NIRPGTSLLQMNNIVPYHEEDDYAYECLDGKDCASFFCCFDDCRSGAWRENRMHVRVSKI
DSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgttgtttcagtgaggccaacagtgatcgaaacagctgtgtatgtcaacagc
attggaccagtagaccccataaacatggaatacaccattgatatcttctttgcccagaca
tggtatgacagccgactgaaattcaacagctcgatgaagttgctcatgctcaacagtaat
atggtaggcaaaatatggattccggacacattcttcagaaattcccggaaatcagatgcc
cactggatcaccactccaaaccgcctcctgaggctatggagcaatggaagagtgatgtac
acactgaggttgactattaatgcggagtgttaccttaagctgcataactttccaatggat
gagcactcgtgtccactggagttttcaagctatggttatccaaagaatgagatcatgtac
cggtggcagagacgagcagtggaggtagcagaccagcggtactggagactctaccagttt
gcttttgtagggttgaggaacacctctgacgtggcgcacacccagtcaggggaatatgtc
attttgacgatcttttttgacctgagtcggagaatgggctactttactatccagacctac
attccctgcagtatgatcgttgtcttgtcctgggtctccttttggatcaacaaggatgct
gtcccagcccgcacatctctaggtatcaccacagtgctcactatgacaactctaagtacc
atctccaggaagtccctccccaaggtatcctatgtcaccgctatggatttgtttgtctct
gtctgcttcatctttacctttgctgccctcatggagtacggcactctgcactacttcacc
agcaacagacagaccaagaagtctaaagccaacaataacacacagaaggctcccatggtc
aatatccgccctggcacatccctgctacagatgaacaacattgtgccctatcatgaggag
gatgactatgcctatgagtgtttggatggaaaagactgtgccagcttcttctgctgcttc
gatgactgccgctcaggtgcctggcgtgaaaacaggatgcatgtacgagtttccaagatt
gattcttactcacgaatatttttccccactgcttttggccttttcaatctggtttattgg
ataggttatctttatctataa
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