Scomber japonicus (chub mackerel): 128375496
Help
Entry
128375496 CDS
T09718
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128375496
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128375496
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128375496
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
128375496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Laminin_G_1
T9SS_plug_1st
Motif
Other DBs
NCBI-GeneID:
128375496
NCBI-ProteinID:
XP_053191834
LinkDB
All DBs
Position
16:complement(11447885..11455768)
Genome browser
AA seq
712 aa
AA seq
DB search
MSSLIFVQLLLLGLSVIDTTTDTWRHCTDLLPLDLLSFVLERDTSRLLPGVQMRQAGGVR
GVHFSSPHTSMSFSSSQLLVNCDLFPKEFSIVVTLKATQIVSKKNEYIFSLMEAKKEEKR
AMEEKEEEDDEGNIFERNKERTVSEEQEKKQVKNNEGGGRIILGLRLSRKRLHFVFKGHG
GVIENWVFRGTLADNQWHTLVLAVGGQHVRLTVDCNSPQEIIPSRHFPSDLYIQGSRFHI
GSRGKWKGLFSGLMRQLVLVPGSDASHQICPSSYPQLAALSVPPFLLDLPVVASETNSHL
TSYGLEKQVSVGLERPCSELLRGQLWFNPLRKGLYLCDGRVWTTVLEDHKRLDYVLEHQV
LTTSSETHDVEVFQVSGMGLMAAMAHRSTAFGSAVYQWTHTGFELYQNISTQGALAWRHF
NMGKNVFLVVSNSPTNNRFKSEGDFSVIYKWSKRRKQFVKFQILQTHCARDWEAFTIKRQ
TYLAVANHRIGNNNHTIDSVIYKWNRLTKSFEAHQKLQTSGAYDWEFFTVGPYHFLVVAN
AFDGVTTSVDSVIYIWLNGSFQVFQTIKTFCATDWEMFQIGSRVFLAVANGHRLYGNGPS
RYAINSTIYELDMNGQLFVRFQDILTYSAVDWEFFSLGEEYFLVVANSFNGESYSLNSIL
YRWQGYEGFVPVHWLPTIGCSDWEFFSSKGESYLIYSSAKAPLSKVFKLKIY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgctgatatttgtgcagctccttcttctggggttaagtgtcattgacacaacc
actgacacatggagacactgtacagatttgctccctctggatcttctgtcttttgtcctc
gagagggacacctccaggctcctgccaggggtgcaaatgagacaagctggaggggtgagg
ggtgtacatttctcgagccctcatacttccatgagcttttcctcctcccagctgttggtg
aactgtgacctcttccccaaagaattctccattgttgtgacactaaaagccactcaaatt
gtgtccaagaaaaatgaatacatcttttccttgatggaggcaaaaaaagaagagaaaaga
gctatggaggagaaggaagaggaggacgatgaagggaacatttttgaaaggaataaagaa
cggacagtcagcgaagagcaagaaaagaagcaagtcaagaataatgaaggaggtggacgg
atcatcttgggactaaggctctctagaaagcgtctacactttgttttcaaaggtcacggc
ggggtcatagagaactgggtgtttcgaggtactctggctgataaccagtggcacactctt
gtcctggccgtaggtggtcaacatgtcaggctcacagttgactgcaattcaccacaggaa
atcattccctccaggcatttcccttcagacctctacattcagggatccagattccacatt
ggaagtcgggggaaatggaaaggcttgttttcaggtctgatgcgacagttggttctggtg
ccaggttcagatgcctcccatcagatctgcccctcttcctacccccaactagcagctctt
tcagtaccgccatttctcttagatctccctgtcgtagcaagtgaaacaaacagccatctg
acatcttatggactagagaagcaagtgtcagtgggtttggagcggccatgctcagagttg
ctaagaggccagctgtggttcaatccgctcaggaaaggcctttacctctgtgatggtaga
gtgtggaccacagtgcttgaggatcataaacggttggattatgtgctggaacatcaggtc
ctcaccaccagctcagagacacatgatgtcgaggtgttccaggtatctggcatgggtctg
atggcagctatggctcaccggtccacagcctttggttctgctgtgtatcagtggacccac
acaggtttcgagctctatcagaatatcagcacccaaggagctctggcatggagacacttc
aacatgggcaaaaatgtatttctggtggtgtcaaactctccaacaaacaatcgttttaag
tcggagggagacttctcagtgatatacaagtggagcaaaagaagaaaacaatttgtaaag
ttccagatcctgcagacccactgtgcacgggactgggaggcctttaccatcaaacgacag
acctatcttgctgtggccaatcatagaataggtaataataatcacactatagatagtgtg
atatacaagtggaacaggttaaccaagtcatttgaggctcaccagaagctgcagacctca
ggggcctacgactgggagttcttcactgttggaccgtaccattttctggtggtagcaaat
gcttttgatggagtgaccacatctgtagactctgtcatctacatttggctcaatggaagc
ttccaggtgttccagacaattaagacattttgtgccacagactgggaaatgttccagatc
ggcagcagagtcttcctggccgttgccaatggacacagactctatggtaatggaccaagt
cgatacgccatcaattccactatctacgaactggacatgaatggacaactgtttgttcgc
ttccaggatattctcacctacagtgcagtggactgggagttctttagccttggggaggaa
tattttctggttgtcgctaactcctttaatggagagtcgtactctctcaacagcattctc
tacaggtggcaaggatatgaaggctttgttcctgttcattggctcccaacaattggatgc
agtgactgggagtttttcagctccaaaggagaatcctatctcatctactctagtgccaaa
gcacctctctcaaaagtgttcaagctgaaaatttactag
DBGET
integrated database retrieval system
