Scomber japonicus (chub mackerel): 128375508
Help
Entry
128375508 CDS
T09718
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375508 (lingo2b)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128375508 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
ig
Ig_2
LRR_Zer-1
LRR_9
LRR_EndoS
V-set
LRRNT
Sp38
LRR_6
Motif
Other DBs
NCBI-GeneID:
128375508
NCBI-ProteinID:
XP_053191851
LinkDB
All DBs
Position
16:complement(22081351..22083219)
Genome browser
AA seq
622 aa
AA seq
DB search
MTEGNVGKRDMQHPALHYNHLFLGGALLLLLASSALSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIITPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLALRSL
NFRSNLLQLVPAGVLSGLTNLSRLDLSHNRLVVLLDHAFQDLRRLTFLEVGDNELVFVSQ
RAFTGLLGLQSLTLERSNLTVVPTDALAHLHSLVELHMRYLSISFLKPFSFKRLSRLRRL
EIDYWPWLDTLPPLSLHGLNLTTLFITNTNLSAFPGAALRNLPYLTHLNLSYCRIQHIHQ
GELGQLPYLMELRLQGAHLISIEPFAFLGLKSLQLLDVSQNRLDSLERGVFASPDSLQRL
CLGGNPLVCDCRLLWLLNSHKPPSLQILDVQPECSAPEHLMGKTIRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCMAEGAPRPTVVWITPHRRYITAKSSGRVEVQPDGSL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLGIGDRSHYINRSSNYLSDSNSTWGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRK
SNGAAAEASETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcaacgtgggtaaaagagacatgcaacacccagccctgcactacaaccac
ctcttcctgggcggggcattgctgcttctcctggccagctcagctctgagctgccccgcc
cgatgtgagtgctctgcccagagcaagtcggtgagttgccaccgcaagcgcctgcccacc
atccctgaaggcatccccattgagacacgcgtcctggatctcagcaagaacaagctacgc
atcatcacaccagacaacttctcttcattccaacagctagaggacctggatctcagcgac
aacctcatcagtgtggtcgagcctggctcatttcgttctcagcttgctctccgctcgcta
aacttccgcagtaacttgctccagctggttcctgcaggtgtcctgtcaggcctgaccaac
ctctcccgccttgacctcagccacaaccgactggttgttcttctggatcatgccttccaa
gatctgcgcaggttgacatttctagaagtaggtgacaacgaattggtttttgtctcccag
cgggccttcacaggattacttgggctccagagtctgacactggaacgttctaatctgacc
gtggttcctactgatgctctggcacatctgcacagcctggttgaactgcacatgcgctat
ttgagcattagttttcttaagcctttttcctttaagaggctgtcacgtctccgccgacta
gagattgattactggccctggctggacacactgcctcccctctcactgcatggcctcaac
ctcacaacattgttcataaccaacactaacctgtctgccttccccggcgcagcattgcgc
aacctgccctacctcacacatctcaacttgtcctactgccgcatccagcacatccatcaa
ggagagctaggccaactcccatatctgatggagctccgtctccaaggggctcatctgatt
tctattgaaccatttgcatttttgggcctcaaatctttgcaactactagatgtgtcacag
aaccgactggactccctggagaggggagtattcgcctcaccagacagcctccagaggctt
tgtctgggtggaaatccattagtgtgcgactgcagattgctctggttgctgaatagccac
aagcccccatccctgcagattctggatgtccagcctgagtgcagcgctcctgagcacctc
atgggaaaaactatccgtgacctcaaggaacctctggtctccaggtacatgacctgcacc
aagccacggattggacccaacacaacacagctgctgatggctgatgagggtcagcctgcc
cgtctgagctgtatggcagagggagcacctcgacccacagtggtctggattacaccgcac
agacgctacatcacagccaagagcagtggtagggtggaagtccaaccagatggttccctg
gagatcaaggcagcagagctgcatgacagtggggtgtacttatgtattgccagtaaccct
gctggcaatgctagcctgtcagcctctttagcagtgaagagcctgggcataggggacaga
tctcactatatcaacaggagctcaaactatctctcagattctaacagcacttgggggaat
gggacagtattgtacaacatgacagtccccatagacataaagactatcattatatctaca
gccatgggctgcctgtccttcctaggtgtggtcatcttctgcttcctgcttctgtttgcc
tggagtcgagggaaaggacgccataagagcaactttgatattgagtatgtcccacgcaaa
tccaacggggcagcagctgaagcgtcagaaacaagtggcccccgacgggtcaatatgaaa
atgatttga
DBGET
integrated database retrieval system
