Scomber japonicus (chub mackerel): 128375572
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Entry
128375572 CDS
T09718
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375572 (scfd1)
Membrane trafficking [BR:
sjo04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
128375572 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128375572 (scfd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
PS_pyruv_trans
Peptidase_S66
DUF3882
Motif
Other DBs
NCBI-GeneID:
128375572
NCBI-ProteinID:
XP_053191929
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Position
16:complement(1458993..1506090)
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AA seq
632 aa
AA seq
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MAASVREKQTVALKRMLNFNAPPLKNTGAEPVWKVLIYDRFGQDIISPLLAVKELRDMGI
TLHLLLHSDRDPIPDVPAVYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALAANAVTQVTKVYDQYLNFITLEDDMFILCHQNKELISYHAINRGDLQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMAAGQ
FSFQRPLFVLADRNVDMATPLHHTWTYQALIHDVLDFHLNRVLMEEGAGAEPSPAGARPK
KKSRKAYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITAQLAPSESDLEQYKTALTDAGCDLSPL
NYIKQWKAFTKMAATPANYGNSGVKPMGLFSRVMNSGSQLVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
AKSKQGKKIVYGCSELFNAAQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgtccgggagaagcagacagtcgctttgaagcgaatgttgaacttcaac
gctcctcctctgaagaacacaggagctgagccagtatggaaggtgttgatatacgaccgg
tttggacaggacatcatctccccgctgctggccgtcaaagagctgagagacatgggcatc
accctgcacctgctgctccactcagacagagatcccatcccagatgttccagctgtgtac
ttcgtcatgcccacagaggagaacattgacaggatatgtcaggacctgaggaaccagctg
tatgagtcgtattacctgaacttcatctcggccatcagcagaagtaaactggaagacatc
gccagcgctgctctggccgccaacgctgtcacccaagtcaccaaggtgtatgatcagtac
ctgaacttcatcactctggaggacgacatgttcatcctctgccaccagaacaaggagctc
atctcctaccacgccatcaacagaggagacctccaggacacagacatggaggcgatcatg
gacacgatagtagacagtctgttctgtttctttgttactctgggcgccgtgcccatcatc
cgctgtccccgtggcaacgcagcagagatggttgccgtgaagttggataagaagctgcgt
gagaaccttcgtgacgccaggaacagtctgttcacaggagacaacatggccgccgggcag
ttcagtttccagaggcctctgttcgtcctggccgaccgtaacgtggacatggccacgccc
ctccaccacacctggacctatcaggcgctgatccacgacgtcctggacttccacctgaac
cgcgtgctgatggaggaaggagccggagcagagccgtcgcccgccggagcaagaccaaag
aagaagagcaggaaagcctacgacctcactgctgctgacaagttctggcagaaacacaag
gggagtccgtttcctgaagtcgccgaatctgttcaagaggagctcgatacgtaccgagct
caggaggacgaggtgaagcgcctgaagagcatcatgggtttagagggagaggatgaagga
gccatcagcatgttgtcagacaacacggccaaactcacgtctgctgtcagctctttgcca
gaactgctggagaagaaacgactcatagatctacacaccaacgtggccacggccgtactg
gatcacatcaagagtcgtaaactggacgtttactttgagtatgaagagaaactgatgagc
aagtcgactttagacaaatcactgctggacatcatcagtgacccagatgcggggacgcca
gaagataaaatgaggctgttcctgatctattacatcactgctcagctggctccgtcagag
tcggacctggagcagtataagacggctctgaccgacgcaggctgtgacctttcacctctc
aactacatcaaacagtggaaggcatttaccaagatggccgccactccagccaactatggc
aacagtggagtcaaacccatgggattgttttccagagtgatgaatagcggctctcagctc
gtgatggagggagtgaagaacctggtgctcaaacagcacaatcttccagtcactcggatc
ctggacaacctgatggagatgaagtcaaacccggaaacagacgactatcgatactttgac
cccaagatgctgcgaggcagcgagagctccattcccaggaacaagaacccgtttcaggag
gccatcgtgttcgtggtgggaggaggaaattacatcgagtaccaaaacctggtggactac
gccaagtctaaacaggggaagaagatcgtttacggttgcagtgaactcttcaacgctgct
cagttcatcaaacaactctcccagctgggccagaagtga
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