Scomber japonicus (chub mackerel): 128375590
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Entry
128375590 CDS
T09718
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03060
Protein export
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
128375590 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sjo02044
]
128375590 (srp54)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
128375590 (srp54)
Secretion system [BR:
sjo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
128375590 (srp54)
Eukaryotic Sec-SRP protein
128375590 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
nSTAND3
DUF2209
NPHP3_N
AAA_33
AAA_17
SRPRB
ResIII
MeaB
AAA_22
AAA
APS_kinase
MobB
AAA_30
AAA_19
PduV-EutP
Zeta_toxin
nSTAND_NTPase7
AAA_16
6PF2K
AAA_18
Thymidylate_kin
CitG
ATP_bind_1
AAA_31
Torsin
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
128375590
NCBI-ProteinID:
XP_053191949
LinkDB
All DBs
Position
16:complement(279001..291441)
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
GENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKMPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagccgacctcggcaggaagatcacctcggcgctgaggtctctcagcaacgcc
acgatcatcaatgaagaagtgctcaatgcgatgttaaaggaggtgtgtgcggctcttctt
gaggccgacgtgaacattaaactggtcaaacagctgagagagaatgtcaaggctgccata
gatctggaggagatggcgtctggtctcaacaagaggaggatgatccagcacgccgtgttc
aaggagctcgttaagctggtggaccccggggtgaaggcctggactccgacgaaaggaaag
aacaacgtcatcatgtttgttggtctgcagggaagcgggaaaactaccacctgctccaag
ctggcgtattactaccagaggaaaggatggaagacctgcctgatctgtgccgacaccttc
agagctggtgccttcgatcagctgaaacagaatgcgaccaaagccaggatcccgttctat
ggcagttacacagagatggacccggtggtgatcgctgctgaaggcgtggagaagtttaaa
ggagagaactttgagatcatcatcgtcgacacgagcggccgacacaaacaggaagactcg
ctgtttgaggagatgctgcaggtgtccaacgctgtgcaaccggataacatcgtgtacgtg
atggacgcgtccatcggccaggcctgcgagtctcaggccaaagctttcaaagacaaagtc
gacgttgcctcggtgatcgtcaccaagctggacgggcacgccaaaggaggcggagctctg
agcgctgtggcggccaccaggagtcccatcatcttcatcggaaccggagaacacatcgac
gacttcgaacccttcaaaacacaaccgttcatcagcaagcttctggggatgggagacatc
gagggtttgatcgaccgagtgaacgaactgaagcttgacgacaacgaagaactgatcgac
aaactgaaacacggtcagttcacgctcagagacatgtacgagcagttccagaacatcatg
aagatgggaccgttcggacagatcatgggtatgatcccgggctttgggacagacttcatg
agtaaaggaaatgaacaggagtcgatggcgagactcaagaagctgatgaccatcatggac
agcatgaacgaccaagagctggacagtaaggacggggccaagctcttcagtaagatgccg
aaccggatccagcgggtcgcccgggggtcaggggtcgcgacccgggacgtccaggagctg
ctgacccagtacaccaagttcgcccagatggtgaagaagatggggggcatcaagggcctc
ttcaaaggaggagacatgtctaagaacgtgaacccgtctcagatggccaaactgaaccag
cagatggccaagatgatggatccccgagtcctgcaccacatggggggcatggcgggtctc
cagtcgatgatgcgtcagttccagcagggcgccgccggcaacatgaaagggatgatggga
ttcaacaacatgtga
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