Scomber japonicus (chub mackerel): 128375704
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Entry
128375704 CDS
T09718
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sjo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sjo01100
Metabolic pathways
Module
sjo_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128375704 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128375704 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128375704 (xylt1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
128375704 (xylt1)
Glycosyltransferases [BR:
sjo01003
]
O-Glycan biosynthesis
Glycosaminoglycan
128375704 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
128375704
NCBI-ProteinID:
XP_053192087
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All DBs
Position
2:30758477..30833891
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AA seq
923 aa
AA seq
DB search
MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNVREKRDRVAG
NKAAGSDYFQHGVQRRQHLPPPGRGASRHIQQPDGYYSHRPKEKNRVDSNNENSVPKDFD
NIDNSNFGARSQPHRQSVGATSNKQQREHLQEKAHAQQQTWRESSPSLGRNSNEVLPVGH
QPLAVGNNASYSQHRHQHPHRRQVTAAPLEVTYDQPPKCEISGKEAISALSRAKSKECRQ
QIAEVYCRHKEGGLMPEKVTRYCPLEGKANANVQWDEDSTESFPSKPVRIAFVLVVHGRA
SRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQVHALAAQYPNVRVTPWRMATIWGGASLL
TMYLRSMADLLAMRDWNWDFFINLSAADYPIRTNNQLVAFLSKYRDMNFIKSHGRDNARF
IRKQGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRMFVEYVINSKDNLVTNMK
RFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPND
FKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDTYLFGPFPQGTPALNSYWENMYDEP
DGVASLSDTQLTYYHSFSRLGLARAAASLQGNPKDHSCRYFPMGHPVSVHLYFQADQFQG
YLVKHHATNLATSKLETMETWVVPKKNFKLTSPPANTFSRLLFAEIGTEWDAKERLFRNF
GGLMGPMEETVGMQKWTKGPNVTVTVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPL
RPGVWSVRILHHWSPVAEMRFLIVPLTFHKHQPIRQEDTLRLHNGPLKNSYMEQSFHGLN
PVLNIPVSLSFVEQAKRNAALTGPELEHWLDSLVHEQWEAADVCAVGLTACPVMQACSKN
PWSSLSPDPKSQLRPPRADGRIR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggcttgtgtgctcgcaggttggcccgccggtcgcggtccgccctgatagca
gccctcactgtgctgctggtgcagacgctgattgtgtggaacttcagcagcctcgactcc
ggcgaagacagggaaaacggaggctccaatgtgcgggagaagagggaccgggtcgcgggc
aacaaagccgctggcagcgactatttccagcacggggtccagcggcggcagcatcttccc
ccgcctgggaggggggcgtctcgccacatacagcagccggatggttattactcccaccgg
ccgaaggagaaaaacagagtggacagcaacaacgagaactccgtaccaaaagactttgat
aacatagacaatagtaactttggtgctcgctcgcagccacaccggcagtctgtaggggct
actagcaacaagcagcagcgggagcacctgcaggagaaggcccacgcccagcagcaaaca
tggcgggaaagctctccaagtctgggccgcaactcgaacgaagtgctgcctgtagggcac
cagccgctggcggtcggcaacaacgcctcatactcacagcacagacatcagcacccgcac
cggaggcaggtgactgcagcaccgcttgaggtgacctacgaccagccacccaagtgcgag
atcagtgggaaggaagccatttcagctctgtccagagccaagagtaaggagtgccggcaa
cagatcgcagaggtgtactgcagacacaaggaaggcgggttaatgcctgagaaggtcacc
cgttactgcccccttgagggtaaagccaatgctaatgtccagtgggatgaggactccact
gagagctttccatcgaaaccagtgagaatagcgtttgtcctggtggtccatggaagagcc
tctcgccagtttcagcgcctcttcaaagccatctaccacacttcccactactactacata
catgttgatcagcgctccaactacctgcacaggcaggtgcatgccttggctgcacagtat
cccaatgtgagggtgacaccatggcgcatggccaccatctggggtggtgccagtctgttg
accatgtatcttcgcagtatggctgacctgctggccatgagggactggaactgggatttc
ttcatcaacctcagtgccgccgattaccccatcaggaccaataaccagctggtggccttc
ctgtccaaatacagagacatgaacttcatcaagtcccatggcagggacaacgccaggttt
atcagaaagcaaggcctggaccgtctgttctttgagtgcgacacccacatgtggaggctg
ggcgatcgtaaaatcccagagggcatctctgtggacggcgggtccgactggttccttcta
aaccgcatgttcgtggaatatgtcatcaactccaaggacaatttggtcaccaacatgaaa
cgcttctacgcctacactctgctgcctgccgagtcgttcttccacacagtgctggagaac
agtgcccactgtgaaagcatggtggataacaacctgcgcatcaccaactggaaccgtaaa
ctgggctgtaagtgccagtacaagcacatcgttgactggtgtggatgctccccaaatgat
ttcaagcctgcagatttccaccgtttccagcaaacagtgcggcccaccttctttgccagg
aagtttgaagccagcgtgaaccaggaaatagtgaaccagctggacacctacctgtttgga
ccattcccccaggggacgccggccctaaactcgtactgggagaacatgtacgacgagcca
gatggcgtggccagtctgtcggacacacagctcacgtactaccactccttctcgcggctg
ggcttggccagggctgccgcctcgctgcagggaaacccaaaagatcacagctgcaggtat
tttcccatgggccacccggtgtcagtgcatctgtacttccaggcagaccagttccagggc
tacctggtcaagcatcacgccaccaatctggccacaagcaagttggagaccatggagacc
tgggtggtacccaagaagaacttcaagctgacttctcctccggccaacacattcagcagg
ttgctgtttgcagagatcggtacagagtgggatgcaaaagaacgcctgttccgaaacttt
ggcggcttgatgggccccatggaggagacggtaggcatgcagaagtggactaaggggcct
aacgtcaccgtcacggtcgtgtggattgaccccaccaacgtcatcgcagccacctacgac
attctaatagacgccagcgccgagtacacccactaccggccgccgctcaaccaacctctg
cggcctggcgtgtggagcgtccgcatcctgcaccactggagccccgtggctgagatgcgc
ttccttatcgtccccttgacctttcataagcaccagcccatacgacaagaggatactctg
aggctccacaacgggccgctgaagaacagctacatggagcagagtttccacggtctcaac
ccggtgctcaacatccccgtcagcctgagcttcgtggagcaggctaagaggaacgcagcc
ctgaccggcccagagctggagcattggctagacagcctggtgcacgagcagtgggaggcg
gccgatgtctgtgccgtgggccttaccgcctgccctgtcatgcaggcctgctccaagaac
ccatggagctccctgagcccagaccccaaatcccagctgagaccaccgcgtgcagatggg
cgcatcaggtag
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