Scomber japonicus (chub mackerel): 128375734
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Entry
128375734 CDS
T09718
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128375734 (cdan1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
128375734 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
VMAP-M8
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-GeneID:
128375734
NCBI-ProteinID:
XP_053192126
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Position
16:10239469..10252420
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AA seq
1340 aa
AA seq
DB search
MAALLESLLLKKVDVNTVLDWLKNVEECDRLAFSQPEVTVHKQEFVPFLLNFLREQSSQS
LTHGPATPAKTPSRPRPTAQIQGSSDRRGCKSAGGGGAGSRSASRIQLFSPAPSVSPVNE
WDAAAQSGTHCVSGISAFSSPSFSTTWSPASRPSGSERRSGQRISLGDYMVSPPDLQNSP
NFQSQKGRKRGGGGTAVGGQGRHGGGRGGHPSDEFGRWESGGRRSGRGGGGGYSRISEQV
SPPSVGELNFNNLEDFPPVGSSPISLAGTKPSRRINPTPVSAERPHSKPKTCFTSTPFSK
ASSPQSGPEALEGSMPAGSPLSLQEERELLKREKSKRAQQTCSPLPSSLDPCTPTKSGVR
TGSKVTPDLQTPSPEPSKVTFAFDLDLLAELYCTCISENLVPNIFLELFFVMQLLTSQSP
PTHDDEQDSLCAVNSDVLERCYLRQVHNCVYFAVKVLENLFQLVAHLDKCTLRMLAENER
VASFSPDLRDRLTQAQDGSTAKLSPSASTFIHSVPFQPATDNRSNFSSDKAFHTFKKQRD
IFYEVLREWEDFHKEPGWTFDAVLGSRIRGMMSQLTSAGNHSHFARLFLKQLVQMCKGPR
VNSSSGDTPDADLLGMLGADSGRLKRLEERLIQPQGVVGPCPPPSFPGHQEFFRDFLQAA
SCCQLNQHLQDSLCQQLLQLDEVSILSPPVSVGEGEEEGDGDMEQQDEKQRFTSVLLLAR
LLAKFLGFISFLPYQTSDRPSREIQEAAIALRSKSVPVLDVCAVLSNSVRRRRTILTVPW
LVEFLSMLDFVGPLLLCYRTALGTLLLLYRKMLLGRCGEMCYLNKLLMVSVLGWLFQIPV
IPEDIFFTSEFTEVAKLEDSNTSTAGLDCIPLVDQQLLYTCCPFLGEFRKLLAAFVSGSA
AKSGGIIRKITPTSAELKDTPSANRSQQKLQVDLEQAFFHNQPPSLRRTVEFVAERVGSN
AVKHMKATLVSELVERGEKMLRDGLQLPNPNLSKLNDAICAQLCDTGLEALARATRFCCE
KSPEAIRILLPDETSSAVLTTSENITKRLATEKACSWLSGNITALIRREWKSRYDRVVKA
LGSPVAADSGDVGGAVVELEQATTPKRKQGSERVTSCPPDCNHSASLPSDVLIVMKELLS
IAVGPRTDEELPTVSQIRTLLERVRDTLACRKFSTVVSEQMLLNSTVLLACKLVSAELPV
LSLTECSRGGEVVVGPGSGSGPPVRALLEQLAELWERDFCCSAPLHLLFTPITVTAVLKA
TDTEWNNYLFLVRQLVERGVMGEEEVISHWKKLTNLAVPAELMEKFQLQSQSIKPSLPLA
EIQSHMDMLQVSQQTVEGAT
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcgctcctgttgaagaaagtggatgttaatacggtcttagac
tggctgaaaaatgtcgaggagtgcgacaggctggcattcagtcaacctgaggtgacagtc
cacaaacaagaatttgtcccttttctattaaactttctgagagagcagagcagtcagtct
ctaacccatggccctgctacacctgcgaagactcccagccgccccaggcctacagcacag
atacagggctcatctgacaggaggggttgcaaatctgcaggtggtggaggagctggctct
cggagtgccagtcgcatccagctgttttctcctgcgccctctgtgtcccctgtaaatgaa
tgggatgctgctgctcagtcaggcacccactgtgtcagtgggatcagtgctttcagcagc
ccctccttttctacaacatggagcccagcctctaggccctcaggctccgagcgcaggtct
ggccagagaatcagtcttggggactacatggtttctcctcctgacctccaaaacagccca
aacttccagtcacaaaagggacgcaagaggggcggtggtggcacggcggttggaggacag
gggagacatggaggagggcgtggaggacatccgagtgatgagtttgggaggtgggagagt
ggaggaaggagatcaggtagaggaggaggaggaggatacagtaggataagcgagcaggtt
tcacctccatctgtgggtgagctcaatttcaacaatttggaggatttcccccctgttggg
tcatcacccatttctcttgcgggaaccaaaccatctagacgtataaacccaacgccagtc
agcgcagagcggccacactctaaaccaaagacctgcttcacctccaccccattcagtaag
gcctctagtccccagtcagggccggaggctcttgaggggtcaatgccagcaggcagtcct
ctgagcctgcaagaagagagggagctattgaagagggagaaatcaaagcgtgcccagcag
acctgctcccctctgccatcctctctggacccatgcacccctaccaagtcaggagttagg
acgggttctaaggttacaccagacctgcagacaccttctcctgaaccatccaaagtcact
tttgcctttgatctggatctcctggcagagctgtactgtacctgcatatctgaaaaccta
gtgccaaacattttcctggagcttttctttgtgatgcagttgctaacatctcagtctcct
cccactcatgatgatgaacaggatagtttgtgtgcagtaaattcagatgttctggagaga
tgttacctaagacaagtacacaactgtgtgtattttgctgtgaaggttctggagaatctg
tttcagttggtcgctcatttggacaagtgcaccttgaggatgctggcagagaatgaaaga
gtggcgtctttttccccagatctcagggatcgcttgactcaggcccaagacggaagtaca
gccaagctctctccttcagcttccactttcatccactcagtcccattccagcccgctacg
gacaaccgctccaacttcagtagtgacaaagccttccacacctttaaaaaacagagagat
attttttatgaggtgctgcgagaatgggaggactttcacaaggaaccaggatggaccttt
gatgctgttcttgggagtaggatcagaggaatgatgagtcagctgacctctgcaggaaac
cactcacattttgctcgtctgttcctgaagcagcttgttcagatgtgtaaaggcccccgt
gttaacagctcttctggggacacccctgatgctgacctgctgggcatgctgggagccgac
agcgggcgtttgaagcgtctcgaggagcgcctcattcagcctcagggagtcgttggccct
tgccctcctccatccttccctggtcaccaagagttcttcagggacttcctgcaggcagct
agttgctgtcagctgaaccagcacctgcaggacagcttgtgccagcagctccttcagctg
gatgaggtgtccatcctgagccctcctgtttcagttggggagggagaggaggagggagat
ggggacatggagcagcaggatgagaagcagcgattcacctcagtgctgctccttgctcgt
cttctggctaagtttttgggattcatttcttttctgccttaccaaacatctgacagacca
tccagggagattcaggaggctgctatagctctgcgcagtaagagtgttcctgtgctggat
gtgtgtgctgtgctgagtaacagtgtgcggaggaggcgaaccatcctgacagtaccctgg
cttgtggagttcctctccatgttggattttgttggtcctctgctgctctgctacaggact
gctttgggcacattgcttctcctgtacagaaaaatgctgctgggcagatgtggagaaatg
tgttacctgaacaagctgctaatggtgtctgtgttgggatggctcttccagattccagtc
attcctgaagacattttcttcaccagtgagtttactgaggtagcaaagcttgaagacagc
aacacaagtactgctggacttgactgcattcctctggtggatcagcagcttctctataca
tgttgtccatttcttggtgagtttcgtaagctcctcgctgcctttgtgtctggaagcgca
gccaagagtggaggaataattcgcaaaattactcccacttctgctgagctcaaagataca
ccgagcgccaacaggtcacagcagaagctgcaggtcgacctcgagcaagctttctttcat
aaccagccgccgtccttgcgtcgcactgtagagtttgtagctgagcgggtcggatccaac
gctgtcaagcatatgaaggccacattagtgagtgagttagtggagagaggtgagaagatg
ctgagagatggactgcagttgcccaacccgaacctatcaaaactaaatgacgctatctgt
gcccagctgtgtgacacaggcttggaggccttggcaagagctaccagattttgctgtgag
aagagtcctgaagctataagaattctgctccctgatgagacatcctccgctgtcctgacc
acatctgaaaacataaccaaacgtcttgcaacagaaaaagcctgcagctggctctctggc
aacattacagcgctgataagacgagagtggaagagcaggtacgatcgcgtggtgaaggct
ctgggtagcccagtggctgcagactctggtgacgtggggggagctgtggttgagctggag
caggcaactacccctaagagaaagcaaggaagcgagagagtgacctcctgccctccagac
tgcaaccacagcgcttctctgccctctgacgtcctcattgtgatgaaggagttgttgagc
atcgcagtcggccccaggactgacgaggaactaccaactgtctctcagatcagaacgctg
cttgagagagtgagagacacactggcctgcagaaagttctcaactgtggtgtcagagcag
atgcttctgaactcgactgttctactggcctgcaagcttgtgtctgcagagttgccggtg
ctgtctctgactgagtgcagcagaggtggcgaggtggttgtgggtcctggttcagggtca
gggcctcctgtcagagcactgctggagcagcttgctgagctgtgggagagagacttctgt
tgctctgcccccctccacctgctcttcaccccaatcactgtcactgctgtgctgaaggcc
actgacactgagtggaacaactacctgttcttggttagacagctggttgaaaggggagtt
atgggcgaggaggaggtcatatctcattggaagaagctaacaaacctagccgtgcctgcg
gagctgatggagaaatttcagctgcagtcgcagagtattaaaccttctttgcctctggct
gaaatacaaagccacatggacatgctgcaggtgtcacaacagacagtagagggagctaca
tga
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