Scomber japonicus (chub mackerel): 128375735
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Entry
128375735 CDS
T09718
Symbol
pcare1
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128375735 (pcare1)
04812 Cytoskeleton proteins [BR:
sjo04812
]
128375735 (pcare1)
Cilium and associated proteins [BR:
sjo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128375735 (pcare1)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128375735 (pcare1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
Motif
Other DBs
NCBI-GeneID:
128375735
NCBI-ProteinID:
XP_053192127
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All DBs
Position
16:24203273..24207285
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AA seq
1154 aa
AA seq
DB search
MGCSPSKGNNFGALGPLRKGRMLPPTPQESPRESQFEDGEKRNSTETTDGETKEMKAVGQ
TQVFQREAPMTPQKKRSVTELAPEAVNMNKLGSQGLENNTVSQRKEKNGDKQDVTEKKPG
RKTKKNTRGVKVLKKKDKDKLPAEQKVDFPEPLVKAHQAAYAFLNPNINKYDIVLGLLEQ
ATQTRTSVQPMVAFMALRYEELIHLLEDIADEGDKVLKENGEHLAWPSQMKNLSSSSPLK
SGSANIEPPPDLLQQLLQYTTQRMRNVSQTVGGIGDSALEEAVEYFACVSELLEEKLKVK
RAVETRIMQLLSRIEMASLRKPGPEDSALFSEDSGIGAENESLAGSERRHRRESCESTGT
NRTTPIGYTSRNIRQGASRPKFVHQISPSVSLTSLNSIGSVCTIMANEQRDSLLGSFDDG
EEDDEDDDKMDRGKGQVTFQKRSNSSPVHHEQQPSRIHPKRIENPENVEMTLKMKKAISS
RIQYVSSPNASAKTKVVGSPKISRRQWTDEGEQSPKRPQTTAPVRRAVVKTTPAAKERRS
RSAESLRSKGEDPTVLELERTQKNLNQRLQRMSKSKVTGKQNQGTSPAQSPVINRRQPSL
EKNSNPQPLKDKAGLTKRTNRKQEVTSDAEEDNKQKDKKTAKGPIKATPPPSPPSSPRPS
SGLCRGRNSVKKLIDTFTQGIEELDSPKVLGPLKGVRKCGVPVLPGLGNVEAVLRTGITS
CRAESMSFEKTEDLDLDSLPPPPLEVLLDNSFESAHSPPTRVADDGATKVPKSPVVKRAV
VSQRLRASFQSVSVLPSKGGPPQGSKVISPAREEQHVTSTQSKVSQPHDQADTDPGKEKD
SFLSRQARKIIHLKHSSDSQSEKSTSYVTTNPSASQKESTDLQDDGNISVPGPNTTLSTV
PPSSVVNSHPPATPPMPRGRMLPSTPSTPSSLHRRLPSPHNFKRQPTPPSSASPPINRKP
PTPPALQRRLPSPPVTKQNILNSNPSSSYPFKAPSPPASPKIQRWSRENSTEDLSSARLI
SNARSVFCPASPSMFEAQPCSVPQPPQAWTATGVSFLSRSWGGRGRFPVSVQGPRPFIRR
SHSDRRPSLSLPPRSPGISVAETCGSEPAICTQGLDDEPTRKDEIWGSQSDLRATSRSAS
HPDLCIVGQSLHRE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctcaccatcaaaaggtaacaattttggggctttgggtcccttgaggaagggt
agaatgctgccccctacaccccaagaaagccccagagagtcccagtttgaagacggagag
aaacgtaattcaaccgaaacaacagatggggaaacaaaggagatgaaggcagttggacaa
acccaggtatttcaaagagaagcacctatgacaccacaaaaaaagagatctgtgactgag
ttagccccagaagcagtaaacatgaataaattggggagtcaaggactggagaacaacact
gtgtcacagagaaaagagaaaaatggggacaaacaggatgtaacagagaaaaagcctggc
agaaaaacaaagaaaaataccagaggtgtgaaagtgctaaaaaagaaagacaaggacaaa
ctacctgctgaacagaaagtggacttcccagagcctctggtaaaagctcaccaagctgcg
tatgcctttttgaatcctaatataaacaaatatgatattgtacttggactgttggaacag
gcaacccaaactcggacgtctgttcagcctatggttgcctttatggctctgcgctatgag
gaattaattcacttactggaagacatagcagatgagggagacaaagttttaaaagaaaat
ggagaacatcttgcttggcccagccaaatgaaaaacctctcttcttcttcaccactgaaa
tctggctctgctaatattgaacccccaccggatttgttgcagcagcttcttcagtacacc
acacaaagaatgcggaatgtaagtcagactgttggaggaattggggactctgccttggag
gaggcagtggaatactttgcctgtgtatcagagcttttagaggagaaactgaaagtcaag
cgtgcagtagagactagaataatgcaactcttatctcgcattgaaatggcctccctgcgc
aagcctgggccagaggattctgctctctttagtgaggacagtggtattggagctgagaat
gaatcccttgctggatctgaaagacgccatagacgagaaagttgtgagtccactgggaca
aatagaactactcctataggatacacctccaggaacattaggcaaggagcatcaaggccg
aagtttgtgcatcaaattagtccaagtgtttccctcacttctctcaactcaataggttct
gtatgtaccataatggctaatgagcaaagagactcattgctaggatcctttgatgatggg
gaggaagatgatgaagatgatgataagatggatagaggcaagggacaagtaacgtttcaa
aagcgatcaaattcttcacctgtacaccatgaacaacaaccatcccgcatacacccaaag
cgcatagagaatcctgaaaatgtagaaatgaccctcaaaatgaaaaaagctataagtagt
aggatacagtatgtctcatcaccaaacgccagtgccaaaacaaaggtagtgggcagccca
aaaatcagtagacgccagtggactgatgagggggaacaatctccaaagagacctcaaacc
acagcacctgttcgaagggcagtggtaaaaacgaccccagcagctaaagagcgacgttcc
cgttctgcagaatccctgcgaagcaaaggtgaagatcctactgttcttgaactagaaagg
actcagaagaatttaaatcagaggttgcagagaatgagtaaaagcaaagtgactggaaaa
caaaatcaagggacctccccagcacaatctccagtaataaatcgcagacagccctcacta
gagaagaacagcaatcctcaaccactgaaagacaaagcaggattaacaaagcgtaccaac
agaaaacaagaggtgactagtgatgcagaagaagacaataaacaaaaagacaagaaaaca
gcaaagggtcctataaaagccacaccaccccctagtcctccttcatcaccaaggccatct
tcaggcctgtgcagaggcaggaattcagtcaaaaaattgatagataccttcactcaagga
atagaggagctagacagccctaaagtgttggggcctctcaaaggtgtacggaagtgtggt
gttcctgtgctaccaggtttaggaaatgtagaggctgtgcttcgcactgggataaccagc
tgtagagctgaatccatgtcatttgagaagacagaagatttagatttggacagtcttcct
ccacctccattggaagtattattggacaattccttcgaaagtgctcacagtcctcctact
cgtgtagcagatgatggggctacaaaagtgcccaaatcacctgtggtaaaaagggctgtt
gtgtcgcagcgactgagggcctcatttcaatctgtgtcagtgctgccaagcaaaggaggc
cctccacaaggttccaaggttatttctcctgctagagaggaacaacatgtcacatctact
caatcaaaggtcagccaaccacatgatcaagctgacacagacccaggaaaggaaaaggat
tcctttctgtctcgacaagctagaaagatcatacacttaaaacactcttcagattctcag
tcagagaaatcaacaagttatgtaacaacaaatccatctgccagtcaaaaagaatcaaca
gatttacaagatgatggcaacatttcagtgcctggacctaacactacattgtctacagtg
cctccttcttcagtagtcaatagccacccacctgccaccccacccatgcctagggggcga
atgttaccatccacaccttctaccccaagcagcttgcatcgaagacttcccagtcctcac
aacttcaaaaggcaacctactccaccctcttcagctagcccccccatcaatagaaaacct
cccacaccaccagcacttcagaggagactccccagcccacctgttacaaagcagaacatt
ttaaactcaaatccatcctcttcgtaccctttcaaagcaccgtctccaccagcttcaccg
aaaatacaaagatggtcaagagagaacagcactgaagacttatcttctgctcggttgatc
agtaatgcgcgttcagtattctgccctgcttctccatccatgtttgaggcccagccttgt
tcagttccccaaccccctcaagcatggaccgctactggggtctcttttctctcacgttct
tgggggggtcgagggaggtttcctgtgtctgttcaaggacctcgacctttcatccgacga
agccattcagaccggaggccaagtctaagtcttccaccacgatcaccaggcatctcagtg
gctgagacttgtggaagtgagccagcaatatgtacacaggggctggatgatgaaccaacc
aggaaagatgaaatatggggtagccaatcagacctcagagctacatcacgctctgcatca
catccagacctgtgtattgttggacagtctttgcaccgagagtaa
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