Scomber japonicus (chub mackerel): 128375764
Help
Entry
128375764 CDS
T09718
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375764 (trip11)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128375764 (trip11)
Retrieval pathways
128375764 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
TPR_MLP1_2
NPV_P10
Motif
Other DBs
NCBI-GeneID:
128375764
NCBI-ProteinID:
XP_053192155
LinkDB
All DBs
Position
16:complement(7676458..7702085)
Genome browser
AA seq
1971 aa
AA seq
DB search
MSSWLGGIGSGLGQSLGQVGGSLSSFTGQISNFTKDMLLEGVEEVGDAATELQVSNSKLA
ELESSFTSQKSEHDRLKMLHAELEEKLEASEIQIKQQSAEYRTLLQQKDVEISHLKAKQS
FLQEEVQHLQQSAQSASTGLAVLPVTTASSTTTSSSVSSFPSRPSGSSQGFHGDEMDLSD
AIWSQQEINRLSTELMRLEAEVAHWKRMSQASTAAGAGNGDQGEILKLQRTIKDLREEMR
REVDEHQHELTALQDAQRQKMAEVSRRHREELAEYEERIEELEEQNQSGVGQATSSSDAS
KLLELQKSMKSLQEVAEEREKQLSELSASLEDAHSKQASLQLERDDAQEENAGLLQNYTR
LQSSVAELQTRVQEQEGKALQKAQLDQEIQALRQNLAAAEKEIERLKNLDEGEPKEEVEH
ADILELNTIIGTLRQENEDLEQEKLNLQERLKVAEESAVGNNAAEPADSELVEDLQAELD
RREKALRATEEERDTLISELEELDRQNQEATQHMISVKEQLSGQLKEAEADLSKLTAELN
TTKDQKKAVEKELETQKEKTSQSAFTLNDLHMGKQQLERTVKELKDKLGHAHEQSREARR
EISELKKTLQEKEEHLSFAEEKLNQSGERGTEAQGALDELAGKKKELSDLRRELDEMRSS
QEKVMSEDYEMKMENRKLKEQSEQALSQMEQLNKQLKENQTTHNRTVLEKETRIEALKLE
KNQLETELRQTERTLTEQGKQYQQTIEELTRARSMDASALQTDHERAIKLNQEKDMEIAQ
LKRDIEQLASDHRDTNEMLSITVSGQKQLTDLLQEKDVFMDTLKQNAAETQMEMENSISV
ATREAESLRQVLDEKEKQLGFMKEENSHLKEEIDRINDQQSRPQPMAEPRTLDIITELET
EITQLKSSRNGLEEEIQSLRRTLEEQQTSLQAQQTELEQAHARHQQTTLNYDRLINARDE
EIAQLQQSSADSPPVHGEVILQEDKTQSLNQENGNEKHDLSKVEIEKLVKGIKEKETEIS
QLNEKNLSLTKQLDQLVVSRDEVGKLSQMILQKDLEIQALHARVSMGGGGGHSQDVMFLQ
QQLQAYAVEREQVLAVLNEKTRENSQLRSDYHRLMDIMSGKEAALLKLQQENQRLSNMSD
PSGSQEMFKETIQNLSRIIREKDIEIDALTQKCQTLVTVLQSSGGESGAGSGGVSSNQFE
ELLQERDTLKQQVKKMEEWKQQVITTVKNMQHESAQLQEELIKLQGQVSADSDCSSKLSV
DYSRLIQSYELKERRLGSLSQELAHVQQTITQLSSTKDVLLGKLDSVGQTPEVVVAQSSA
PSLTVDAPSHQTVSAVNNNKQQEDVESLRTQLAEKESMIRTLQENNFRLSNSACASESEQ
RSHATEVQQVKDKLDALQRSVREKDLLIKAKGDQLSQVSESLRNRENDNEVLKQAVTNLK
ERALILEMDVKKLKEENELVAARSREKESEFRALQETNMQVSLLLREKEFELSAMSDKAA
TVERMLKDKEQGKSGELNQLLNELKSMQEKAVAFQQERDQVMMALKQKQMETTALQTELQ
HMRDKEQRLNLELERLRNHLLEIEDSYTREALASEDRETELRRKVAMLDVRLATSSSAVE
NASQQASMQVESLQEQLSGVVKQRDDALIQLRTSQEQVNQYAVSLSNLQMVLEQFQQEEK
AMYSAELDKLKKEREQWKTKAQRLEDQASALQMNLDEANAALDSASRLTDQLDLKEEQLE
ELKKQVDVRQEMLEEAQKKLMNLLNSTEGKIDKVLMRNLFVGYFHTPKTKRYDVLRLMGN
VLGVSREDVDKMLEEDGRQGISGWMSGWLGGRGAQSVPNTPQRPTSGQGFNTSFSEMFVK
FLEIESTPSLPAPMLPVHDIKPLSAPPPRRTSSAASSTAAGPAGSSKRAGEANPFLAPRS
AAVPLLAGSGAGGSGGHLLMKPISDALPTFTPVPVSAEASGGAVLKDLLKQ
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtggcttggtggcattggctccggcctcggccagtccctggggcaggtcggg
ggcagcttgtcctctttcaccgggcagatatcaaacttcaccaaagacatgttactggag
ggagtggaagaagtaggagatgctgctacagagctgcaggtgtccaattccaagttggct
gaactcgagtcttcatttacctctcagaaatctgagcacgacagattaaagatgctccac
gcagagctcgaggagaagctggaggcatcagagatccagattaaacaacagtctgcagag
tacagaacccttctgcaacagaaagatgtggagatcagtcacctcaaagctaaacagagc
ttcctccaagaagaagtccagcacctgcagcagtcagcccagtctgcctccaccggcctc
gcagtgctacccgtcactacggcttcctcgaccactacctcctcttctgtctcctctttc
ccgtctcgcccctcggggtccagccagggtttccacggcgatgaaatggacctcagcgac
gccatctggtcgcagcaggagatcaaccggctgtcgacagaactcatgcgtctggaggca
gaggtggcgcactggaagcgaatgtctcaggcatccacagcagcaggagccggtaatggc
gaccagggtgaaattctcaagcttcagaggactattaaggatctgcgagaggaaatgagg
cgcgaggtagatgaacaccagcatgaactgaccgctctgcaggatgcccagcggcagaag
atggccgaggttagccggcggcacagagaggagctagcagagtacgaggagaggatagag
gagctggaggaacagaatcagagtggtgtgggtcaagccacttcttcctcagatgcctcc
aagctgcttgaactccagaaatccatgaagtccctgcaagaagttgcggaggagcgggag
aagcagctgtccgagctgtctgccagtctggaggacgcacacagcaaacaggcctcgctg
cagctggagagagatgacgcccaggaagaaaacgccggactgctgcagaattacactcgt
ctgcagtcctcggtcgctgagctccagacccgagtacaagagcaggaggggaaggctctg
cagaaagcccagttagaccaagagatccaagctttgaggcaaaatcttgcagctgcagaa
aaagaaattgagagactgaaaaacctggatgagggagaaccaaaggaagaagttgagcat
gcagacatcttagagctgaacaccatcattgggacattaagacaagaaaatgaagactta
gaacaggaaaagcttaatctgcaagagagactgaaagtggcagaagaatcagcagttggc
aataatgcagctgagcctgctgactctgagctagtagaagatctacaggcagagctggac
aggagagaaaaggctctgagagccaccgaagaggaacgagacaccctgatctctgagctg
gaggaactggaccgacaaaaccaggaagcaacacagcatatgatctctgtgaaggagcag
ctctctggacagctgaaggaggccgaggcagatctctcaaaactgactgcagagctcaac
acaaccaaagaccagaaaaaggcagtggagaaagagctggagacccaaaaagagaaaacg
agccagagcgctttcacccttaacgacctgcatatgggtaaacagcagttggaacgaaca
gtgaaggagctgaaagacaaactgggacatgcacatgagcagagcagggaggcacgcaga
gaaatctcagaactgaagaagactttgcaggagaaagaggagcatctctcttttgcagaa
gaaaagctgaatcagtcaggcgagagaggaactgaggcacagggggctctagatgagcta
gcagggaagaagaaggagctgtcagacctcaggagagaactggatgagatgaggagctcc
caggagaaggtgatgtcggaggactacgagatgaagatggagaacaggaagttgaaggag
cagagcgagcaggcgttgagtcaaatggagcaacttaacaagcagttgaaggaaaaccag
acaactcataacaggacagtgctggaaaaggaaactcgaattgaagctctaaaactggag
aaaaaccagcttgaaactgaattgaggcagactgaaaggacactaacagagcagggaaaa
caataccagcagaccatcgaagagctgacccgagcccgctccatggatgcttcagctttg
cagactgaccatgagcgtgccattaaactcaaccaggagaaggacatggagatagctcag
ctgaagagagacattgagcagttggcgtctgaccacagagacactaatgagatgctttcg
atcacagtttcagggcagaagcagctgaccgatttgctgcaagagaaggacgtcttcatg
gatactttaaaacaaaatgctgcagaaacgcagatggagatggagaacagtatttcagtc
gccacaagggaagctgaatccctcagacaggtgctagatgaaaaggaaaaacagctgggt
tttatgaaggaggagaacagccatttgaaagaagagattgaccggatcaatgatcagcag
agcagacctcaacctatggctgagcccaggactctggacatcattactgagctggagaca
gagatcacccagctcaagtcctccaggaatggcctggaagaggagatccagagtctgaga
agaaccctggaggaacagcagacttctctccaggctcagcagactgaacttgagcaggcc
catgctcgccatcagcagaccacgctcaactacgacagactcatcaatgccagagatgaa
gagatagcccaactccagcagagctctgctgactctccacctgtgcacggagaggtaatc
ctgcaggaagacaaaactcaatctctaaatcaggaaaatggcaacgagaaacacgacttg
tccaaggttgaaatagagaaactggtgaagggcataaaggagaaagagacggagatcagc
cagctgaacgagaagaacctctcactgaccaagcagctggaccagctggtggtgtctcgc
gatgaagtgggcaaactgtcccagatgatcctgcagaaagatctggagatccaggcactt
catgcaagagtctccatgggtggaggcggtggacacagccaggatgtcatgttcctacag
cagcagctgcaggcgtacgctgtggagagagagcaagtgttagccgtgcttaacgagaag
accagagagaacagccagcttcgctccgattatcaccgtctcatggatatcatgtcaggg
aaggaggcggctctgttgaaacttcagcaggagaaccagcgcctctcaaacatgagcgac
ccctcaggaagccaagagatgttcaaggagaccatccagaatctgtcccgcatcatcaga
gagaaggacattgagattgatgcgctgacccagaaatgccaaacactagtgactgtcctc
cagtcctcaggaggggagtctggtgccggctctggaggtgtcagcagcaaccagtttgaa
gagctgctgcaggaacgggataccctgaaacagcaggtgaagaagatggaggagtggaag
cagcaggtgatcactacagtcaagaacatgcagcacgagtcagcgcagctgcaggaggag
ctgatcaaactgcagggtcaggtctctgctgacagcgactgcagctccaaactgtcagtg
gactactctcgacttatccagagctacgagctgaaggagaggaggctgggaagtctgagt
caggaactcgctcatgtccagcagaccatcacccagctcagctccaccaaggatgtgctg
ctgggtaaactggacagtgttggacagactcctgaagttgtagttgctcagtctagtgcg
ccttctctcacagtagatgctccgagccaccagacggtttcagctgtaaataataataaa
cagcaggaagacgtcgaatcgttgcgaacacagctagccgagaaggaaagcatgatcagg
actcttcaggaaaacaacttcaggctttccaactctgcgtgtgcctcagagagcgagcag
aggagtcatgccactgaggtccaacaggtcaaagataagctggacgctctgcagagatca
gtgagggagaaagacttgctcatcaaagccaaaggagaccaattaagtcaagtcagcgag
tcactacgaaaccgtgagaatgacaacgaggtgctgaagcaggctgtgaccaacctgaaa
gagcgcgcacttattcttgaaatggacgtgaagaagttgaaggaggagaacgagcttgtg
gccgcacgctctcgtgagaaagagtccgagttcagagcgctgcaagaaaccaacatgcag
gtgtctcttctgctcagagagaaggagtttgagctgagtgctatgagtgataaagctgca
accgtggagaggatgcttaaggacaaagagcagggtaaatctggtgagctcaatcagctg
ctgaatgaattaaagtccatgcaggagaaagctgtggcgttccagcaggagagggatcag
gtgatgatggcactcaagcagaaacagatggagaccactgctttacagaccgagctgcag
catatgagagacaaagaacagcggctcaacttggagctggagaggttacgtaatcacctc
ttggagatcgaggactcatatacgagagaagccctcgcttcggaggacagggagaccgag
ctacgcaggaaggtcgccatgctggacgtcagacttgccacgtcctctagtgctgtggag
aatgccagccaacaggccagcatgcaggtggagtcactgcaggagcaactgagcggcgtg
gtgaagcagagggacgatgcgctcatccagctccggacctcccaggagcaggtcaaccag
tatgcagtttcactctccaatctgcagatggtgctagagcaatttcaacaagaggagaaa
gccatgtattcagcagagcttgacaagctcaagaaggaaagggagcaatggaaaacgaaa
gctcagaggttggaagaccaagcatctgcccttcagatgaaccttgacgaggccaacgcg
gctctggattcagcctctcgcctcaccgatcagctcgacctgaaggaagagcaacttgaa
gagctgaaaaagcaagttgacgttagacaggagatgttggaagaggcgcagaagaaactg
atgaaccttctgaacagcacagaggggaaaatagacaaagtcctgatgcgtaacctgttc
gtggggtacttccacacacctaaaaccaagcgctacgatgtgctgaggctcatgggaaat
gtcctgggagtgagccgagaagatgttgataagatgttggaggaggacggacggcaaggt
attagtggctggatgtcaggctggcttggaggcaggggagcgcagagtgtcccaaacact
ccacagcggcccaccagtggccagggtttcaacacttccttctcagagatgtttgtaaag
ttcctggagattgagtcgaccccttcgctgccagcaccaatgcttccagtccatgacatc
aaacctctgagcgccccgcctccgagaagaaccagcagtgctgcttccagcaccgccgca
ggacctgctggatccagcaagcgagccggtgaggccaatcctttcctggcccctcgctct
gccgcggtgcccctgctggccgggtccggcgccggcgggtcaggaggtcacctgctgatg
aagcccatctcagacgctctgcctacatttacacctgtgccggtctcagctgaggccagt
ggtggagctgtcctcaaagacttgttgaagcagtga
DBGET
integrated database retrieval system
