Scomber japonicus (chub mackerel): 128375774
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Entry
128375774 CDS
T09718
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128375774 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128375774 (vti1b)
Membrane trafficking [BR:
sjo04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
128375774 (vti1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF745
DUF3958
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
128375774
NCBI-ProteinID:
XP_053192166
LinkDB
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Position
16:complement(7591509..7596127)
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AA seq
227 aa
AA seq
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MSSEEFEKLHEIYRSLYEELKLMPEKALKCHGEERKRLVRRFDERQGEAEEMLQGMEDEL
RTAPSSYRNAMNTKLRMYRRDLSKLQRDIKISTSGFGSSPQAMEGSHHGLYSSENQHSTH
LQSQRALLLQGTESLNNATQSIERSQRIAAETEHIGTDIIEELGEQREQLDRTRNRLVNT
GENLSRSRKVLRAMSRRLVTNKLLLAVIILMELAILGAVVYLKFFRR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaggaatttgagaagctgcatgaaatctacagatctctgtatgaagagctg
aagctgatgccagaaaaggctctcaagtgccatggagaggagaggaagaggctggtgaga
cgctttgatgagaggcaaggggaggcagaggaaatgttacaaggaatggaagacgagctg
cggacggccccctcctcttaccgaaatgctatgaatacaaagctgcgcatgtaccgtagg
gacctgagcaagctgcagagggacattaaaatctcaacttcaggttttggctcttccccc
caggcaatggaaggaagtcatcatggcctctattcatcagaaaaccagcacagtacacac
ttgcagtcccagagagccttgctgctccaaggcacagagtctctgaacaacgccacccag
agtattgaacggagtcaacgcatcgcggctgagacggagcacattggcacagatatcatc
gaggagctgggagagcagagggagcagctggaccgcaccagaaacagattggtgaatact
ggagagaacctcagtcgaagtcgaaaagtccttcgtgccatgtcacggcggctcgtgacg
aacaagttgctgttagctgttattattttaatggagctggctattctgggtgctgtggtt
tacctgaagttcttccggcgatga
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