Scomber japonicus (chub mackerel): 128375815
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Entry
128375815 CDS
T09718
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128375815
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
128375815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
RRN3
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
128375815
NCBI-ProteinID:
XP_053192205
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Position
16:4567759..4635989
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AA seq
471 aa
AA seq
DB search
MSPKICKNCGGSDIDVDQARGDAVCMTCGSVLEDNIIVSEVEFVETGGGGSSAVGQFVSA
DGGNKNPSFGDGHFTGVGRESRAQTLQRAKQSINTLGRQLQMNQHCLDTAFNFYRMALGK
QLTRGRKASHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGRTFLVLARELCINAPA
IDPCLYIPRFAQLLEFGEKNHDVSMTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIVGVVKVCESTLRKRLTEFEDTPTSQLTIEEFMKTDLDQECDPPCFTAGLQK
KKAHQLEIELKKKMDDVEDEIQSYQDEIDTELQNSRPKLRGVYAAYAKEDAGDDIDNIVS
TSSKLEENEEADEEEEEDVIQAVAKHFGKELGDLTLEALIKLEQKTPEEEEEEEEGEEGG
VPKRKGPTLANILGRMPTAATLGLNESISKCMGEEKENAATRLDYRDESII
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagccccaaaatatgcaagaactgcggcggctcggacatcgatgtggatcaggcgcga
ggcgacgccgtctgtatgacgtgcggctccgtgctggaggacaacatcatcgtgtccgag
gtggagttcgtagagacgggaggaggaggatcatcggccgttggacagtttgtctctgca
gacggtggaaacaagaatccctcttttggagacggacacttcacaggtgtgggcagagag
tctcgagctcagacgctgcagagagcgaagcagagcatcaacactctgggccgccagctg
cagatgaaccagcactgtctggacaccgccttcaacttctaccgcatggctctcggtaaa
cagctgacccgcggtcgcaaagcctcgcacgtcatcgccgcctgcctctacctggtctgc
cgcaccgaggggacgccacacatgctgctggacctcagtgatctcctgcaggtcaacgtc
tacatcctgggaagaactttcctcgtcttggcccgagagctgtgcatcaacgctccggct
atagatccgtgcctctatattcctcgtttcgcccagctgcttgaattcggggagaagaac
catgacgtttccatgacggcgatgaggctggtgcagaggatgaagagggactggatgcac
acgggacgacggccgtctggactctgcggagcggctcttcttgttgcagcacgtatgcac
gagtttcgccgcaccatcaaagaaatcgtcggtgtcgtaaaagtgtgtgaaagcacgctg
agaaaaagacttacagagttcgaggacactcccaccagtcagctgaccatcgaagagttc
atgaagacggatctggaccaggagtgtgaccctccctgctttacagccggactgcagaag
aagaaagcccaccagctggagatcgagctgaagaaaaagatggatgacgttgaagatgaa
attcagagctaccaggatgaaatcgacacggagctgcagaacagcagacccaaactgaga
ggagtttacgccgcctacgccaaagaagacgctggagacgacattgacaacatcgtctcc
acgtcgtctaagctggaagagaacgaggaagcggacgaggaggaagaagaagacgtgatt
caggccgtggccaaacactttggcaaagagctgggagatctcacgctggaggctctgata
aaactcgagcagaagacgccagaggaggaagaggaggaggaggaaggagaggaggggggc
gtcccgaagagaaaaggcccaacgctggccaacatcctgggcaggatgccgacagctgcc
actctgggtctcaacgagtccatcagcaaatgtatgggagaggagaaggagaacgcagca
acgcgtctggattatagagacgagtcgatcatctga
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