KEGG   Scomber japonicus (chub mackerel): 128375846
Entry
128375846         CDS       T09718                                 
Name
(RefSeq) afadin
  KO
K05702  afadin
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04517  IgSF CAM signaling
sjo04520  Adherens junction
sjo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    128375846
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    128375846
   04530 Tight junction
    128375846
SSDB
Motif
Pfam: DIL PDZ RA PDZ_6 PDZ_2 RASSF8-10_RA RA_3 ASPP2-like_RA
Other DBs
NCBI-GeneID: 128375846
NCBI-ProteinID: XP_053192239
LinkDB
Position
16:complement(8595883..8609588)
AA seq 1195 aa
MRFYFEDRVGGNVATKCLRVCSNSSTREVIETLSEKFRPDMKMLTTCYSLYEIHTNKERK
LDLDERPLVVQLNWNSNNREGRFVLKKDEESLKENCHEKEKGGVIENFKRTLSRKEKKKE
KNKIKATDDALGDENGSTEKPPNNSSVSVSNPEMTKQHTGNKKLQQSQADLGSLHPDFLD
QPGLPLGIKLCDNSEEAFLSAVINYTNSSTVHFKLSPAYILYAVGRWRFALQGWGSPPSG
KTHGVTSIADKMVAMTGKVIQRQQAIAGALAFWMANASELLNFLKQDKDLNPLTQQSQMD
LSHLVHKAYSYLIQCLQNELRKHLPIFMIDPEQHGPLPAGIELVLNTLMNAMSLLRRCRV
NPALTIQLFSQLFHFISAWLFNQLMSPEADTLGLRSHYWGAALRQRLTAIEAWAERQGLE
LAADCHLGHIIQATMLLTMKKYSMQDAKKIQSTCFKLNSLQLQTLLAGYLYANNEPHIPP
DLINAIVTAANASADNLIRSEGRDIQLQESLDLHLPFLLPEGGYSCDTVRGIPPGLREFL
EPIYRKGLCSLTSQPNSNGDWTVYFEEPTSSAGSTYVAAQREPEIVTITLKKPLNSGMGV
SIVAAKGAGQDYLGIYIKSIVRGGPAEMNGRLTAGDQLLSVDGQSLVGLSQERAAATMMQ
TGPIVTLQVAKFGASYHGLGALLNEPTPERTAGDKSHAKPNGEALRLHSALDPGHSEQLE
SLHGNSRKKREQIMQRNRELYRSNPNMTTHFALEDEVEPIDPDVRGNNIAAVSTINLCTD
TFHREYLTLPNPKSQNKSISESSQPQQMLKMSLRPLDGQNTRDKQTFMRQALSQENLCVD
NGGPLLDKRQNMWQDQSAKQTMSHYSSFPIRPSFSSHDILSDNSSSAKQQQGTRTSGAGV
WKTPFSQHATPTPSIQPIRIDIPVTRAVSAQSNPPLTTFQHSSSLLAVKKRQKQSPQSQA
YDIYACPISATKKLPQPSLLSQQQRPSTHRDQPAKPQVSITPTKHVSFQEPPTQQKQGAA
PTRQKDLQELSDPWRREAQEKLEKQQRLQVVELLEQEVQELQAKEKRTAQENDRLRKLSL
EWQFQKRLQEVQQRREDEDEEEEDEDLDMMMMIQQLEKRVQTKRSSEGKVNSELSEHTGS
LPSQKEEKANAESTVFLLISMFIHRNQEEKIKRAPAPEKLTFKERQRLFSLASSA
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgcgcttttactttgaagatcgtgttggaggcaacgtcgccacgaagtgcctccgtgtt
tgcagcaactcttccactcgggaggttattgaaactctttcagagaaattcaggcctgac
atgaaaatgctgaccacttgttactctctgtatgagatccacaccaataaagaacgtaaa
ttggatctggatgagagacctttggtggtgcaattaaactggaactccaacaacagagaa
ggacgttttgtgctcaagaaagacgaggagagtttgaaggaaaactgccacgagaaggaa
aagggaggcgtgattgaaaacttcaagaggacactgtcaagaaaggaaaagaagaaagag
aagaataaaattaaagccactgatgatgctctaggagatgaaaacgggtcaactgaaaag
ccgccgaacaacagcagcgtttctgtgtctaaccctgagatgacaaagcagcacacagga
aacaaaaagctacaacagagccaggctgacctcggaagtcttcatcctgactttctagat
caacctggattaccacttgggattaaactctgtgataactcggaggaagccttcctgtct
gcagtcatcaattacaccaacagctccacagttcattttaagctctcacctgcgtacatc
ctctatgcagtggggcgttggcgcttcgctctgcaagggtggggctccccaccgtcagga
aagacacacggtgtaacctcgattgcggacaaaatggtggccatgacaggaaaggtcatc
cagaggcagcaggccatcgccggtgctcttgccttctggatggccaacgcctccgagctg
ctaaacttcctcaagcaagacaaagacctgaacccgctcacccagcaaagtcagatggat
ctgtcccacctggtgcataaagcttacagttacctgatacagtgtctgcagaacgagctg
agaaagcatctgccaatttttatgattgatccagagcaacatggtccactgccggcgggt
atagaattggtgctgaacaccttgatgaacgccatgtctctgttacgtcgctgtcgggtc
aaccctgccctcaccatccagctcttctcccagctcttccacttcatcagcgcctggctc
ttcaaccagctcatgagccccgaggccgacactctgggcctgcgctctcactactggggg
gccgctctccgacagaggttgactgccatcgaggcctgggcagagaggcagggcctggag
ctggctgccgactgtcacctgggacacattatccaggcaaccatgctgctgaccatgaaa
aagtactcaatgcaggatgcgaagaaaatccagagtacctgtttcaagttgaattcgctg
cagctgcagacgttgctggccggctacctctatgcaaacaatgagcctcacatcccccct
gatttaatcaatgccatagtgacagccgcgaacgcctctgcagataacctgattcggagc
gaaggacgggacatccagctgcaggagagcctcgacctccacctgcccttcctgctgccg
gagggaggatactcctgtgacacagtgagagggatccccccggggcttagagaatttttg
gagccaatttaccggaaaggtctctgctctttaacttcccagccaaactccaacggggac
tggactgtgtattttgaagaaccgacgtcctctgcagggagtacatacgtggcagctcag
agagagccggagattgtgacgatcacactgaagaaacctctcaacagtgggatgggggtc
agcattgtggctgccaagggagcagggcaagattatctcgggatttatataaaatctatt
gtcaggggaggaccagcggaaatgaacggcagactaacagctggggatcagctgctgagt
gtcgatggccaaagcctggtcggcctcagccaagaaagggccgcagctaccatgatgcaa
accggcccaattgtgaccttacaggttgcaaagtttggagcgagctatcacggcctcggt
gctctgctgaatgaaccaactccagagaggacagcaggtgataaaagccatgcaaagcca
aacggtgaagcactcaggctgcacagcgctctggatcctggtcattcagagcagctggag
agtctgcatggaaacagcagaaagaagagagagcagataatgcaaaggaacagagagctt
tatcggtccaaccccaacatgaccacacactttgccctggaggatgaagttgaacctatt
gaccctgatgtgagagggaacaacattgcggctgtttccactatcaacctttgcactgat
acatttcacagggaatacttgactcttccgaaccctaaatcccagaacaagagcatatct
gaatccagtcaaccacagcaaatgcttaaaatgtctttaaggcctttagatggacagaac
accagagataaacagacctttatgcgtcaagccctctcacaggagaacttgtgtgtggac
aatggaggccccctgctggacaaaaggcagaacatgtggcaggaccagagtgcgaagcaa
accatgagccactattcttctttcccaattcgcccgagcttctcctctcatgacatactt
tctgataacagctcttctgcaaaacaacagcagggaactcgcacaagtggcgccggagtc
tggaaaacacccttttcacagcatgcaacacctacaccctcgatccaacccatacgcata
gacatccctgtgaccagagcagtgagtgcacagtccaatcctcctctcaccaccttccag
cacagctcctctctgctggcagtgaaaaagaggcaaaaacagagtcctcaatcccaagcg
tatgatatttatgcctgtcccatttcagcaactaagaaactacctcagccttcgcttcta
tcacagcagcaacgacccagcacacacagggatcaaccagcaaaaccacaagtgagcatc
actccaacaaaacacgtctccttccaagaacctcctactcaacagaagcagggagcagct
cctacgaggcaaaaagacctccaggagctgtctgacccctggaggagggaggcccaggag
aagctggagaagcaacagaggcttcaggtggtggagctcctggagcaggaggtgcaggag
cttcaggctaaagagaaacgcacagcgcaggagaacgaccgactccgtaagctcagcctg
gagtggcagtttcagaagaggcttcaggaggtgcagcagagaagagaggatgaagatgag
gaggaagaagacgaggatttggacatgatgatgatgatacagcagctggagaaaagagtg
cagactaaaagaagctctgaaggcaaagtgaacagcgaattgagcgagcacacaggaagt
cttccctcccagaaggaagaaaaagcaaacgcagaaagtaccgtatttctgctaatatca
atgtttattcacagaaaccaggaggagaaaatcaagagagcaccggcccctgaaaagctc
acattcaaggaacggcagcgtctcttttccctagcgtctagtgcataa

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