Scomber japonicus (chub mackerel): 128375846
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Entry
128375846 CDS
T09718
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
sjo04520
Adherens junction
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128375846
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128375846
04530 Tight junction
128375846
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GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RASSF8-10_RA
RA_3
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
128375846
NCBI-ProteinID:
XP_053192239
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Position
16:complement(8595883..8609588)
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AA seq
1195 aa
AA seq
DB search
MRFYFEDRVGGNVATKCLRVCSNSSTREVIETLSEKFRPDMKMLTTCYSLYEIHTNKERK
LDLDERPLVVQLNWNSNNREGRFVLKKDEESLKENCHEKEKGGVIENFKRTLSRKEKKKE
KNKIKATDDALGDENGSTEKPPNNSSVSVSNPEMTKQHTGNKKLQQSQADLGSLHPDFLD
QPGLPLGIKLCDNSEEAFLSAVINYTNSSTVHFKLSPAYILYAVGRWRFALQGWGSPPSG
KTHGVTSIADKMVAMTGKVIQRQQAIAGALAFWMANASELLNFLKQDKDLNPLTQQSQMD
LSHLVHKAYSYLIQCLQNELRKHLPIFMIDPEQHGPLPAGIELVLNTLMNAMSLLRRCRV
NPALTIQLFSQLFHFISAWLFNQLMSPEADTLGLRSHYWGAALRQRLTAIEAWAERQGLE
LAADCHLGHIIQATMLLTMKKYSMQDAKKIQSTCFKLNSLQLQTLLAGYLYANNEPHIPP
DLINAIVTAANASADNLIRSEGRDIQLQESLDLHLPFLLPEGGYSCDTVRGIPPGLREFL
EPIYRKGLCSLTSQPNSNGDWTVYFEEPTSSAGSTYVAAQREPEIVTITLKKPLNSGMGV
SIVAAKGAGQDYLGIYIKSIVRGGPAEMNGRLTAGDQLLSVDGQSLVGLSQERAAATMMQ
TGPIVTLQVAKFGASYHGLGALLNEPTPERTAGDKSHAKPNGEALRLHSALDPGHSEQLE
SLHGNSRKKREQIMQRNRELYRSNPNMTTHFALEDEVEPIDPDVRGNNIAAVSTINLCTD
TFHREYLTLPNPKSQNKSISESSQPQQMLKMSLRPLDGQNTRDKQTFMRQALSQENLCVD
NGGPLLDKRQNMWQDQSAKQTMSHYSSFPIRPSFSSHDILSDNSSSAKQQQGTRTSGAGV
WKTPFSQHATPTPSIQPIRIDIPVTRAVSAQSNPPLTTFQHSSSLLAVKKRQKQSPQSQA
YDIYACPISATKKLPQPSLLSQQQRPSTHRDQPAKPQVSITPTKHVSFQEPPTQQKQGAA
PTRQKDLQELSDPWRREAQEKLEKQQRLQVVELLEQEVQELQAKEKRTAQENDRLRKLSL
EWQFQKRLQEVQQRREDEDEEEEDEDLDMMMMIQQLEKRVQTKRSSEGKVNSELSEHTGS
LPSQKEEKANAESTVFLLISMFIHRNQEEKIKRAPAPEKLTFKERQRLFSLASSA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttactttgaagatcgtgttggaggcaacgtcgccacgaagtgcctccgtgtt
tgcagcaactcttccactcgggaggttattgaaactctttcagagaaattcaggcctgac
atgaaaatgctgaccacttgttactctctgtatgagatccacaccaataaagaacgtaaa
ttggatctggatgagagacctttggtggtgcaattaaactggaactccaacaacagagaa
ggacgttttgtgctcaagaaagacgaggagagtttgaaggaaaactgccacgagaaggaa
aagggaggcgtgattgaaaacttcaagaggacactgtcaagaaaggaaaagaagaaagag
aagaataaaattaaagccactgatgatgctctaggagatgaaaacgggtcaactgaaaag
ccgccgaacaacagcagcgtttctgtgtctaaccctgagatgacaaagcagcacacagga
aacaaaaagctacaacagagccaggctgacctcggaagtcttcatcctgactttctagat
caacctggattaccacttgggattaaactctgtgataactcggaggaagccttcctgtct
gcagtcatcaattacaccaacagctccacagttcattttaagctctcacctgcgtacatc
ctctatgcagtggggcgttggcgcttcgctctgcaagggtggggctccccaccgtcagga
aagacacacggtgtaacctcgattgcggacaaaatggtggccatgacaggaaaggtcatc
cagaggcagcaggccatcgccggtgctcttgccttctggatggccaacgcctccgagctg
ctaaacttcctcaagcaagacaaagacctgaacccgctcacccagcaaagtcagatggat
ctgtcccacctggtgcataaagcttacagttacctgatacagtgtctgcagaacgagctg
agaaagcatctgccaatttttatgattgatccagagcaacatggtccactgccggcgggt
atagaattggtgctgaacaccttgatgaacgccatgtctctgttacgtcgctgtcgggtc
aaccctgccctcaccatccagctcttctcccagctcttccacttcatcagcgcctggctc
ttcaaccagctcatgagccccgaggccgacactctgggcctgcgctctcactactggggg
gccgctctccgacagaggttgactgccatcgaggcctgggcagagaggcagggcctggag
ctggctgccgactgtcacctgggacacattatccaggcaaccatgctgctgaccatgaaa
aagtactcaatgcaggatgcgaagaaaatccagagtacctgtttcaagttgaattcgctg
cagctgcagacgttgctggccggctacctctatgcaaacaatgagcctcacatcccccct
gatttaatcaatgccatagtgacagccgcgaacgcctctgcagataacctgattcggagc
gaaggacgggacatccagctgcaggagagcctcgacctccacctgcccttcctgctgccg
gagggaggatactcctgtgacacagtgagagggatccccccggggcttagagaatttttg
gagccaatttaccggaaaggtctctgctctttaacttcccagccaaactccaacggggac
tggactgtgtattttgaagaaccgacgtcctctgcagggagtacatacgtggcagctcag
agagagccggagattgtgacgatcacactgaagaaacctctcaacagtgggatgggggtc
agcattgtggctgccaagggagcagggcaagattatctcgggatttatataaaatctatt
gtcaggggaggaccagcggaaatgaacggcagactaacagctggggatcagctgctgagt
gtcgatggccaaagcctggtcggcctcagccaagaaagggccgcagctaccatgatgcaa
accggcccaattgtgaccttacaggttgcaaagtttggagcgagctatcacggcctcggt
gctctgctgaatgaaccaactccagagaggacagcaggtgataaaagccatgcaaagcca
aacggtgaagcactcaggctgcacagcgctctggatcctggtcattcagagcagctggag
agtctgcatggaaacagcagaaagaagagagagcagataatgcaaaggaacagagagctt
tatcggtccaaccccaacatgaccacacactttgccctggaggatgaagttgaacctatt
gaccctgatgtgagagggaacaacattgcggctgtttccactatcaacctttgcactgat
acatttcacagggaatacttgactcttccgaaccctaaatcccagaacaagagcatatct
gaatccagtcaaccacagcaaatgcttaaaatgtctttaaggcctttagatggacagaac
accagagataaacagacctttatgcgtcaagccctctcacaggagaacttgtgtgtggac
aatggaggccccctgctggacaaaaggcagaacatgtggcaggaccagagtgcgaagcaa
accatgagccactattcttctttcccaattcgcccgagcttctcctctcatgacatactt
tctgataacagctcttctgcaaaacaacagcagggaactcgcacaagtggcgccggagtc
tggaaaacacccttttcacagcatgcaacacctacaccctcgatccaacccatacgcata
gacatccctgtgaccagagcagtgagtgcacagtccaatcctcctctcaccaccttccag
cacagctcctctctgctggcagtgaaaaagaggcaaaaacagagtcctcaatcccaagcg
tatgatatttatgcctgtcccatttcagcaactaagaaactacctcagccttcgcttcta
tcacagcagcaacgacccagcacacacagggatcaaccagcaaaaccacaagtgagcatc
actccaacaaaacacgtctccttccaagaacctcctactcaacagaagcagggagcagct
cctacgaggcaaaaagacctccaggagctgtctgacccctggaggagggaggcccaggag
aagctggagaagcaacagaggcttcaggtggtggagctcctggagcaggaggtgcaggag
cttcaggctaaagagaaacgcacagcgcaggagaacgaccgactccgtaagctcagcctg
gagtggcagtttcagaagaggcttcaggaggtgcagcagagaagagaggatgaagatgag
gaggaagaagacgaggatttggacatgatgatgatgatacagcagctggagaaaagagtg
cagactaaaagaagctctgaaggcaaagtgaacagcgaattgagcgagcacacaggaagt
cttccctcccagaaggaagaaaaagcaaacgcagaaagtaccgtatttctgctaatatca
atgtttattcacagaaaccaggaggagaaaatcaagagagcaccggcccctgaaaagctc
acattcaaggaacggcagcgtctcttttccctagcgtctagtgcataa
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