KEGG   Scomber japonicus (chub mackerel): 128375876
Entry
128375876         CDS       T09718                                 
Symbol
sde2
Name
(RefSeq) splicing regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sjo03041]
    128375876 (sde2)
   03032 DNA replication proteins [BR:sjo03032]
    128375876 (sde2)
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128375876 (sde2)
Spliceosome [BR:sjo03041]
 Complex C
  Other components
   Complex C specific factors
    128375876 (sde2)
DNA replication proteins [BR:sjo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    128375876 (sde2)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    128375876 (sde2)
SSDB
Motif
Pfam: SDE2 SDE2_2C Sde2_N_Ubi_vert EcsC Exonuc_VII_L SAP
Other DBs
NCBI-GeneID: 128375876
NCBI-ProteinID: XP_053192257
LinkDB
Position
2:485215..488761
AA seq 454 aa
MEVFISSHSLKFSKVEFADGASVRDVLLRYTEGQGLSSEDFYVLRDGRVSDLQDRLQHGS
VYRLEPRLRGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKEMAEWLKKQA
EREAEKEQRRLERLQRKLAEPKHQFTDPEYQQQCHDLSERLEDSVLKGLQVSCSSQVKVD
DVSAVKRRSSDDSEQPEQKKKKQKKTAAAACFWTGVGDLPSSEEEDEEEEDEDESPSTSS
SCGAAAAVAMTTQRKDDDSPSSSSSCGAAVAMTTETKDDNSPSSSSSCGAAVAMTTQMEA
EDSPSSSCSTSSQTVTRTSETSCSQQPQRVPAAAVQPPAAVDVSPVAVDVSPAAVVDPSS
VADPSPAVDVSSAAVVDPSSVADPSPAVDVSSAASPQQLESLGLDVLKEELMSRGLKCGG
TLAERAARLFSVRGLTAAQINPALLAKPAKTKKK
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaggtgtttatctcctctcacagcttaaagttcagtaaagttgagttcgcagacgga
gcttcagtcagagatgttctgctcaggtacaccgagggacagggtttgtcctcggaggac
ttctacgtgctcagagacggccgggtgtcagatctccaggatcgtctgcagcatggatcc
gtctatcgcctggagccgcggctcaggggaggcaaaggagggttcggctccatgcttcga
gctcttggcgctcagatcgagaagacgacgaatcgtgaagcctgcagagatctgagcggc
cgtcgcctccgagacgtcaaccacgagaaagagatggcggagtggctgaagaagcaggcg
gagcgcgaggcggagaaggagcagcggcgtctggagcggctccagaggaaactggccgaa
cccaaacaccagttcaccgacccggagtaccagcagcagtgccacgacctgtcggagcgc
ctcgaggactccgtgctcaaaggtctccaggtgtcctgcagctctcaggtgaaggtggac
gacgtctctgccgtgaagagacggagctcagacgacagcgagcagccggagcagaagaag
aagaagcagaagaagacggcggcggcggcgtgtttctggacgggcgtgggcgacctgccg
agctcagaggaggaagacgaggaggaggaagatgaggacgagtctccgtccacgtcctcc
agctgtggagcggctgctgctgtcgccatgacgacacagaggaaggatgacgactctcca
tcctcatcctccagctgtggagcggctgttgccatgacgacagagacgaaggatgacaac
tctccatcctcatcctccagctgtggagcggctgttgccatgacgacacagatggaggcg
gaggactctccatcctccagctgctccacgtcctctcagaccgtcaccagaacctcagag
accagctgctctcagcagcctcagcgtgtccctgcggcggcggtccagcccccggcggcg
gtggacgtgtccccggtggcggtggacgtgtccccggcggcggtggtggacccatcctcg
gtggctgacccgtccccggcggtggacgtgtcctcggcggcggtggtggacccatcctcg
gtggctgacccgtccccggcggtggacgtgtcctcggcggcgtccccccagcagctggag
tctctgggtctggacgtcctgaaggaggaactgatgtctcgcgggttgaagtgcgggggg
acgctggcggagcgcgccgcccggctgttctcggtgcgcgggctgacggcggcgcagatc
aacccggcgctgctcgccaaacccgccaagaccaagaagaagtga

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