Scomber japonicus (chub mackerel): 128375895
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Entry
128375895 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128375895
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128375895
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
DFF-C
Motif
Other DBs
NCBI-GeneID:
128375895
NCBI-ProteinID:
XP_053192278
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All DBs
Position
2:complement(707925..716000)
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AA seq
1122 aa
AA seq
DB search
MNLKSLILSTSCPLMCRGAGSTLLFLLKSTISSFGLLNTLVLLFIDPVSSEVPSDQSAQQ
HQTQLDSIFMLLEENIVTFVKKELKRVQRGLSPDDPECLESQSEDEEVLDGEEEEQRRSS
REAFLKITVHFLRRMKQEELAECLQSRSRAAKCRRKLKSNLEKKFQCVFEGIAKAGNPTL
LNQIYTPLYITEGGTAEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPGRDEPIRTV
MTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFFT
ETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLP
SARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQASTIISHIKTSR
SLHIMCHIPVFCWITATVLEDVLKSREGGKLPKTLTEMYIHFLVVQSKLKNIKYDGGAET
DPHWSKKSRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVCSGVFTQVFKEER
GLYQDKVFCFVHLSIQEFLAALHVHLTFIKSGVNLLAQQSASLRPKPKRSKTKSTRFYQS
AVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLQGLLRQTGSSSKTNQKTVNYIKKKISEN
LSAERSINLFHCLNELNDRSLVEEIQQFLRSGSLSTDKLSPAQWSALVFILLSSEKDLDV
FDLKKYSASEEALLRLLPVVKASNKALLTGCNLSERSCAALSSVLSSQSSSLRDLDLRNN
NLQDSGVKQLSAGLESPHCGLETLRLTDCNLSERSCAALSSVLSSQSSSLRDLDLSHNNL
QDSGVKQLSAGLESPHCGLETLSLSGCLITEEGCASLASALSANPSHLRELDLSYNHPGD
SGEKILSAGLKDPHWRLDTLRMDHGGPQRLKPGVRKYACELELDPNSMHRNLKLSDNNRK
VTNVEEHQSYPDHPDRFDSWPQLLCRNDLTGRCYWEVEWRGYVDISVSYRRISRKGNSDD
CLFGWNDQSWRLRCSDDGRYSVYHNKRETSISSSSSSSSSSSSSSVSNRVAVYVDCPAGT
LSFYRVSSDTLIHLHTFNTTFTGPLCAGFAVWSGSSVSLCPL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaaagtcactgatcctctcaacctcgtgtcctttgatgtgcaggggagcgggt
tccacactcctctttctcctgaagtccactatcagttcttttggtttactgaacaccttg
gttttattgttcattgatccggtgagctcagaggttcccagtgatcagtctgcacagcag
catcaaacacagctggactccatatttatgctgctggaggagaacatcgtcacttttgtg
aagaaggagctgaagagagtccagaggggtctgagtccagatgacccagaatgcttagag
agtcagagtgaggatgaggaggtgttggacggtgaggaggaagagcagaggaggagcagc
agagaggcatttctgaagatcacagtgcacttcctgaggagaatgaagcaggaggagctg
gctgagtgtctgcagagcagaagtcgtgctgcaaagtgtcgacgtaaactcaagtctaac
ctggagaagaagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaaccctt
ctgaatcagatctacacaccgctctacatcacagagggagggactgcagaggtcaatgat
gaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaacaaca
atcagacaagaagacatctttaaagcctcacctggaagagatgaaccaatcagaacagtg
atgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggac
tgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttcagagag
ctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttact
gaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgac
ggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgtt
acagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccc
tctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgt
gtcggcatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcagg
aagagattcagagatgaggagcaggccagcaccatcatctcccacatcaagacatcacga
agcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggag
gatgtgttgaaaagcagagagggaggtaagctgcccaagactctgactgagatgtacatc
cacttcctggtggttcagtccaaactgaagaacatcaagtatgatggaggagctgagaca
gatccacactggagtaagaagagcaggaagatgattgagtctctgggaaaactggctttt
gagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcctcagtgtgctcaggagtgttcacacaggtctttaaagaggagaga
gggctgtaccaggacaaggtgttctgcttcgtccatctgagcattcaggagtttctggct
gctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggcacaacaatca
gcatccctgcgcccaaaaccaaaaagaagcaaaactaaatcaacacgtttctaccagagt
gctgtggacgaggccttaaagagtccaaatggacacctggacttgttcctccgcttcctc
ctgggtctttcactgcagaccaatcagactctcctacaaggtctgctgagacagacagga
agtagctcaaagaccaatcagaaaacagtgaactacatcaagaagaagatcagtgagaat
ctttctgcagagagaagcatcaatctgttccattgtctgaatgaactgaatgatcgttct
ctagtggaggagatccaacagtttctgagatcaggaagtctctccacagataaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtg
tttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtc
aaagcctccaacaaagctctactgactggctgcaacctctcagagagaagctgtgcagct
ctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgaggaacaac
aacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgtgga
ctggaaactctcagactgactgactgtaacctctcagagagaagctgtgcagctctgtcc
tcagttctcagctcccagtcctctagtctgagagatctggacctgagtcacaacaacctg
caggattcaggagtgaagcagctttctgctggactagagagtccacactgtggactggaa
actctcagtctgtcaggatgtctgatcacagaggaaggctgtgcttctctggcctcagct
ctgagtgccaacccctcccatctgagagagctggacctgagctacaatcatccaggagac
tcaggagagaagatcctgtctgctggactgaaggatccacactggagactggacactctc
aggatggaccatggtggaccgcagagactgaaacctggtgtgaggaagtatgcctgtgaa
ctggaactggatccaaactcaatgcacagaaatctcaaactgtctgataacaacaggaag
gtgacaaatgtggaggagcatcagtcatatcctgatcatccagacaggtttgactcctgg
cctcagctgctgtgtagaaatgatctgactggtcgctgttactgggaggtcgagtggaga
ggatatgttgatatatcagtgagttacagaagaatcagcaggaaaggaaacagtgatgac
tgtttgtttggttggaacgatcagtcctggagactaagatgctccgatgatggtcgttac
tctgtctatcacaataagagagaaacatccatctcctcctcctcctcctcctcctcctcc
tcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcact
ctgtccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccaca
ttcactggacctctgtgtgctgggtttgcagtctggtctggttcctcagtctctctgtgt
cctctgtag
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