Scomber japonicus (chub mackerel): 128375932
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Entry
128375932 CDS
T09718
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sjo04091
]
128375932 (atrn)
Lectins [BR:
sjo04091
]
C-Type lectins
Others
128375932 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_5
EGF_LMN_ATRN
PSI
Kelch_4
CUB
Kelch_6
EGF_TEN
Kelch_2
EGF_Teneurin
NANM
PSI_integrin
EGF_laminin
EGF_2
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
128375932
NCBI-ProteinID:
XP_053192328
LinkDB
All DBs
Position
16:5998515..6152748
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AA seq
1373 aa
AA seq
DB search
MYGATRRACSGYGRDRSLLMLLTALLLSVVGLLSGLPGVTEAKECDKPCMNGQCNAATGS
CVCFPGWVGDQCQHCGGRFRLTGPSGYLTDGPGNYKYKTKCTWLIEGQPNTILRLRFNHF
ATECSWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSHSGYALLHFFSDAAYN
LTGFNISYRVNTCPNNCSGRGECRVGNSTGSVFCECEANWKGEACDVPYCMADCGYPERG
QCRGKACVCEAGWQGPDCSVSVPANSSFWTREEYTEAGLARASHKAVVDQGIMWVIGGYV
FNSSDYHIVKAYNLSSKSWLNLDPSVNTVTPRYGHSLALHEGKIYMYGGKIDSTGNVSSQ
LWVFHIQNQTWVLLSPRAKEQYAVVGHSAHIVPPIQEGASPIMLVLFGHCPLYGYISQVQ
EYNIVKNTWNMVSTEGALVQGGYGHSSVFDPGTRAIYIHGGYKAFSANKYGLAGDLYKFD
VDKRKWTVLRDSGFFRYLHTAVIVSGSMLVFGGNTHNDTSMSHGAKCFSADFLSYSLACD
EWTVLPRPDLYHDVNRFGHSAVFSDSAMYVFGGFNSLLLSDVLMYTSPSCLAFTSQASCN
QAWPGIHCVWNSTQGTCLPWESNAVSPEQQQLPASCNTRSYSDSDRCDQYTDCYSCTANT
NGCQWCSSLCVSLGSNCTSATGAIAEYDVCPKDNPSYVCNKKTSCKSCAVDQNCQWEPRN
QDCISLPENVCGESWHLVGNSCLKFITAKDSYDNAKLACRSHNAVLASLTTQKKVDFVLK
ELQIMSVVYKASVTPWVGLRKINVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCGYLAEPA
PSGLKAQTCISPVNGSLCERPANHSAKQCRTPCAMRTICSECTSSSSECMWCSNMKQCVD
SNAYVASFPFGQCMEWYTMNTCPPENCSGYRTCGQCLEQPGCGWCTDPSNTGKGQCIEGS
HRGPFQTSVPAPSTLPGLPASPQPALNASMCPSEAKYNWSFIHCPACQCNGHSQCVNESV
CEKCEDLTTGRHCENCISGFYGDPTNGGSCQPCKCNGHASMCNTNNGKCFCTTKGIKGDR
CHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRHYTAINFVATPEEPNRDLDMF
INASKNFNLNITWATSFTAGTQTGEEIPIVSRSNIKEFKDSFSNENFDFRNSPNITFFVY
VSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQL
LREMQQMASRPFATINVALETDEEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIFVRLP
RGTGGIPPPGQSGLAVASALVDVSQQMCVGYKEKSGGLRNRKQQPSAQPSTCI
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgactcggcgggcctgctcgggctatggccgggaccggagcctgctgatg
ctgctaaccgcgctgctgctgtcggtggtcggtctgctgtccggtttaccgggcgtcacc
gaggcgaaggagtgcgacaagccgtgcatgaacggacagtgcaacgccgccactggcagc
tgtgtgtgcttccccggctgggttggggaccaatgccagcactgcggagggcgattcagg
ctaacgggtccctctggttacctgactgacggaccaggaaactacaaatacaagaccaag
tgcacctggcttattgagggacagcctaacaccatcctccgattacgtttcaaccatttt
gccaccgagtgcagctgggaccacctctacgtgtatgacggagactccatttacgcccct
cttctggctgcgttcagtggtcttatcgttcctgaacgttacgggaacgagactgttcct
gaggttgtgtctcactccggatacgcactgctgcacttcttcagcgacgccgcctacaac
ctgaccggattcaacatttcctacagggtgaatacatgtcccaacaactgctccggtcga
ggggagtgccgtgtgggaaactccaccgggtcggtattctgcgagtgcgaagccaactgg
aagggggaagcctgcgatgttccctactgcatggctgactgtggctaccccgagcgaggt
caatgccggggcaaggcctgcgtttgcgaggccggatggcaaggtccagactgctccgtc
tccgtgcctgccaactcttccttctggacgcgggaggaatacacagaggccggtctggcc
agggcttcccacaaggccgtggtggaccaaggcatcatgtgggtcatcggcggctacgtc
ttcaactcctctgactatcacatagtgaaagcgtataacctgagcagcaagagctggctg
aaccttgacccctccgtcaacactgtcacaccacgatatggtcactcactggcgctgcat
gaggggaagatctatatgtacggaggaaagatagattcaacaggaaatgtgtccagccag
ctgtgggttttccacatccagaaccagacgtgggtcctcctgagccctcgggccaaagag
cagtacgctgtggtgggacattcagcccacatcgtgcctcccatccaagagggagccagt
cctatcatgctggttctgtttggacactgtcctctctatggttacatcagccaagtccag
gagtataacatcgtcaagaacacatggaacatggtatctacagaaggtgcgttggtccag
ggcggctacggccacagcagtgttttcgaccccggcaccagagccatctacatccacgga
ggctacaaggccttcagcgccaacaagtacggcctggctggagatttgtacaagtttgac
gtggacaagaggaaatggaccgtcctgagagacagcggcttcttccgttacctccacaca
gccgtgatagttagcggatccatgctggtgtttggaggaaacacgcacaacgacacatct
atgagccacggcgccaagtgcttctccgccgacttcctatcctacagtctggcatgtgat
gagtggacagtgctacctcgaccggacctttaccacgatgtgaaccgcttcgggcactcg
gcagtcttcagtgacagtgcgatgtatgtgttcggtggattcaacagcctgctgctcagt
gacgtcctcatgtacacctcgcccagctgtctggccttcaccagccaggcgtcatgcaac
caggcttggcccgggatccactgtgtctggaacagcacccaggggacttgcctgccctgg
gagagcaacgctgtctcaccggaacagcagcagcttccagcttcctgtaacacaagatca
tattctgatagcgacaggtgtgaccagtatacagattgctacagctgcaccgccaacacc
aacggctgccagtggtgttcaagcctttgtgtttctctgggaagcaactgtacctctgcc
acgggggccatagctgagtatgatgtttgtcctaaggacaacccctcttatgtgtgcaac
aagaaaaccagctgcaagagctgtgctgtggaccagaactgccagtgggaacctcgcaac
caggattgcatctcactaccagagaatgtgtgcggtgaaagctggcatctggtgggcaac
tcctgtctgaagttcatcacagcgaaggactcgtacgacaacgctaagctagcctgcagg
agccacaacgctgtcctggcctcactcaccacgcagaagaaggtggactttgtcctgaag
gagctgcagataatgagtgtggtgtacaaggcgtcagtgacaccctgggtggggctcagg
aaaatcaacgtgtcgtactggtgctgggaggacatgtcgcccttcaccaacactaccctg
cagtggctgcctggtgagccgagcgacgcggggttctgcggctacttggccgagccggca
cccagcggactgaaagcccaaacctgcatcagcccggtgaacggcagcctctgtgaacgg
ccagccaatcacagtgccaagcagtgccggacgccatgtgccatgagaaccatctgcagt
gaatgcaccagcagcagctccgagtgcatgtggtgcagcaacatgaagcagtgcgttgac
tccaacgcctacgtggcctccttccccttcggacagtgtatggagtggtacaccatgaac
acatgtccaccggagaactgctccggttacagaacatgcggtcagtgtctggaacagcca
ggctgcggctggtgcaccgaccccagtaacacaggaaaaggtcagtgtatagagggctcg
caccgcgggcctttccagacctccgtaccggccccgtccaccctgcctggtctgcctgcc
agcccccagccggccctcaacgccagcatgtgccccagcgaggccaagtacaactggtcc
ttcatccactgtccagcttgtcagtgcaacggtcacagccagtgtgtcaacgagagcgtg
tgcgagaagtgcgaggacctgacaaccggccgacactgtgagaactgcatctccggtttc
tacggagatccgaccaacgggggcagctgccagccctgcaagtgcaatggccacgccagc
atgtgcaacaccaacaacggcaaatgcttctgcactaccaagggcatcaaaggagatcgc
tgccacctgtgtgaagtcgagaatcgttaccaaggcaaccctctcaaaggaacatgctac
tacacgctgctcatcgactaccagttcaccttcagcctgtcgcaagaggacgaccgacac
tacaccgccatcaacttcgtggccacgcctgaggagccaaaccgagatctagacatgttt
ataaatgcttccaagaacttcaacctgaacatcacctgggcaacgagcttcaccgcagga
acccagaccggcgaagagattcccatcgtctcccgtagcaacatcaaggagttcaaagac
agcttctccaacgagaactttgatttccgcaacagcccaaacataaccttctttgtctat
gtcagcaacttcacatggcccattaagattcaaatcgccttctcccagcacagtaacttc
atggatctggtgcagttctttgtcacgttcttcagctgcttcctgtccctgctcctggtg
gccgccgtggtttggaagatcaaacagagctgctgggcgtcacggcgacgagagcaactg
ctgagagagatgcaacagatggcaagccggcctttcgctaccatcaacgtcgccttggag
acggacgaggagccgcctgacctgatcggaggaaacgtcaagtccgttccaaaacccatc
gcccttgagccttgctttggcaacaaagccgcagtgctctccatctttgtgcggttaccc
aggggaaccggtggcatccctcctccaggacagtctggtcttgctgtggccagtgcgctg
gtcgacgtctctcagcagatgtgtgtgggctacaaggagaagtctggaggcctgaggaac
cgcaaacagcagcccagcgcacaaccatccacctgtatctga
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