Scomber japonicus (chub mackerel): 128376696
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Entry
128376696 CDS
T09718
Symbol
si:dkey-119f1.1
Name
(RefSeq) structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128376696 (si:dkey-119f1.1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
128376696 (si:dkey-119f1.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
Laminin_II
SMC_hinge
Crescentin
AAA_29
DUF1664
AAA_21
FANCL_d1
NPV_P10
FtsK_SpoIIIE
ATG16
AAA_16
Motif
Other DBs
NCBI-GeneID:
128376696
NCBI-ProteinID:
XP_053192459
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All DBs
Position
17:complement(17683437..17694232)
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AA seq
1091 aa
AA seq
DB search
MSKRKSSSVSDKPHKRAKPVEEEEEDENVDDREQEDPLLSKQMQCAGEVVSDAGIVESIT
LKNFMCHSLLGPFTFGPNVNFIVGNNGSGKSAVLTALIVSLGGNAQATNRGLSLKGFVKE
GESSADVSITLRNKGKDAYKPEVYGPSIILDLRITRDGLRTYKLRSKSGQLVSTKKEELL
SILDNFNIQVNNPVSVLTQEMSKYFLHSKGEGDKYKFFMKATQLEQMREDFVYIKTTKHV
TEDKACQHSESLKDTKRKYLEKEDRYKSLASLDEMRTKLEELQKQMAWALVTEMEKELEP
MTDKLRSDRRSTEKFDEKVEEWKNKVEGAEKKYKQIQEQLEGITQQVQELQPKCAELKTE
AQKRNTLLKSSEVTVHRCKANLRDLEKDKVQLSSRINDLNLSISQTSGSENQARKERMQQ
IQTELDKLRHHISTFGQQIDQYQHACHRAKEEQGKMRREQEVLQKSIEANSRNLQTMESS
RSNRLRRFGEHMPPLLNAIHEAHKRGQFRHRPRGPLGYLISLKDPEHALAIEVCLKGQLH
AFTCDNHEDEKVLLGIMTRVFSTGRRPAIITSHFLPHVHDTRKRAVNHNEYPSVLQALEI
EDPVVANCLIDQRGIESILLIKNRTDARRVMQGRNPPQNCNQAFSKEGDQIFNNRSYTAE
QTRANYLSGDVEEEIRHLQREIENQKGQANRFQQQMKKLDDDIKQNEGLQRRAYIEQKTT
KDKATKLQLELTDLQNVEEPQSEDLKPLEEDLQEIVSKISSKRAEHEEARTQMADLKASY
EKAEREYNQHKEKINTIAEEADSIKDELSKTDQEVMKCKHHKKHYDEKRSTHLRNIQNME
GTLKSKEQELQTSISKAQEICPERLEVRRTARSLDSEINRLKVKITTQQEQQGDREEVVR
QYREALESYNNMAQQMKNLNSFIKSLDSVMTHRVQVYSEFRRFLSARCKYYFDSMLAQRG
YTGSMTFDHKNETLSISVQPGQGNKADLSDMRSLSGGERSFSTVCFVLSLWAITETPFRC
LDEFDVYMDMVNRRISMDMMLKVAASQRHRQFIFLTPQSMSSLPVSKIIQILRLKDPDRG
NKNQRNQDEDQ
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagaaaaagcagctctgtcagtgacaaaccccacaaacgggctaaacccgtg
gaagaggaagaggaagatgaaaatgttgatgatagggagcaggaagatcctctgctgagt
aaacagatgcaatgtgccggcgaggtggtgagcgatgcagggattgtggagagcatcaca
ctgaagaacttcatgtgtcactctctccttggcccgttcacttttggtccaaatgtcaat
tttattgttggcaacaatggaagtggaaagagtgctgtcctgacagctctcatagtttcc
ctaggcgggaatgcacaggccacaaacagaggattgtcactgaaaggttttgtgaaggaa
ggagaaagctcagctgatgtatcaatcacactgcgtaacaaaggaaaggatgcttacaaa
cctgaggtgtatggtccatctatcattttggacctgagaataacacgtgatgggttaagg
acatacaaactcaggagcaaatcaggtcaacttgtttcaaccaaaaaggaagagctcttg
tccatcctggacaattttaatattcaggtcaacaatcctgtgtcagttctcactcaagaa
atgagcaagtacttcctacactccaaaggagagggggacaagtacaagttttttatgaaa
gctacccagctggagcagatgagagaagactttgtctacatcaaaactaccaagcacgtc
acagaagataaagcatgtcaacatagtgaaagcttgaaagacacaaagcggaagtacctg
gagaaagaggaccgttacaagagcctggcatcacttgatgagatgcgcaccaagctagag
gagttacagaaacagatggcttgggctttggtcactgagatggagaaggagttggagcca
atgacagacaagctgcggtcagacagacgttctaccgagaaatttgatgagaaagtggaa
gaatggaagaataaggtcgagggggctgagaagaagtacaagcagatccaggaacaattg
gaggggatcacccagcaggtccaggagctccagcccaaatgtgctgagcttaagacagag
gcccagaaacgaaatacccttctcaagtccagcgaggtcacagtccacagatgcaaggca
aacctgagggacctggaaaaggacaaggttcaactgtcatcaagaataaatgatctcaac
ctaagcatcagtcagacatcaggatcagagaaccaggccaggaaagagcgcatgcagcaa
atccagactgagctggacaaactgagacaccatatctccacttttggccagcagattgac
cagtaccagcatgcctgccaccgtgccaaagaggaacaaggaaagatgaggagggagcag
gaagtactccaaaagtctattgaagccaacagcagaaatctgcagacaatggaaagcagt
cgatccaatcgtctgcggcgctttggagagcacatgcccccactcctcaacgccatccat
gaagctcacaaaaggggccagttcaggcacagaccccgaggacctctgggttaccttatt
agcctgaaggacccagaacatgccctggctatagaggtgtgtcttaaaggccagctgcat
gctttcacttgtgacaaccatgaggatgagaaagtgctgttagggatcatgaccagagtg
ttctccacaggccgaagacctgcgatcattaccagccattttctcccacacgtccatgac
acaagaaagagggccgtgaatcacaatgagtacccctccgtgcttcaagctctagaaatt
gaggacccggttgtggcaaactgtctgattgatcaaagagggattgagagcattctatta
ataaagaatcgcaccgatgctcggcgagtgatgcagggcagaaaccctcctcagaactgt
aaccaggctttctccaaggagggagatcagatctttaataaccgcagttacactgccgag
cagaccagagccaactacctctcaggagatgttgaggaagagatcaggcacttgcagagg
gagatagagaaccagaaaggtcaggcaaatcgcttccagcaacaaatgaagaagttggat
gatgacatcaaacagaacgaagggctgcagagaagagcctacatagagcagaagactacc
aaagataaagccacaaagctacaactggagctgacagacctgcagaatgtagaggagcct
cagtcagaggatctcaagcccctggaggaggatctccaggagattgtgagtaaaatctct
tcaaagcgtgcagagcacgaggaggcacgaactcagatggccgacctcaaggcctcctat
gagaaggcagagagggagtacaatcagcacaaagagaagatcaacaccatcgctgaagag
gccgattcaatcaaggatgagctgagtaagactgatcaggaggtgatgaagtgcaagcat
cacaagaaacactacgacgagaagcgcagtacccatctccgaaacatccagaacatggaa
ggcacccttaaaagcaaggaacaggaactgcagacatctatatccaaggcccaagagatc
tgcccagagcgcctggaagtacgtcggacagccaggagcctggacagtgagatcaaccga
ctcaaggttaagatcacgactcagcaagaacaacaaggtgaccgtgaagaagttgtgagg
cagtaccgtgaggcgctggagagctacaacaacatggcacagcaaatgaagaacctcaac
agcttcatcaaaagcctggacagtgtcatgactcatagagtccaggtttactctgaattc
aggaggttcctttcggcccgctgtaaatactactttgatagcatgctggctcagagagga
tacactggaagtatgacctttgatcacaagaatgaaacactctccatctcagtgcagcca
ggtcaaggaaacaaggctgacttgagtgacatgcgctccctgtcaggaggcgagcgctcc
ttctccactgtttgctttgttctatctctttgggccatcacagagacgccttttcgctgc
cttgacgagtttgatgtttacatggatatggtgaacaggaggatatcaatggacatgatg
ctgaaggtggctgccagccagcgccacagacagtttattttcctcaccccacagagtatg
agttcccttcctgtgagtaaaatcatccaaatcctccgtctcaaagatccagaccgcggc
aacaaaaaccaaagaaatcaagacgaggatcagtag
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