KEGG   Scomber japonicus (chub mackerel): 128376700
Entry
128376700         CDS       T09718                                 
Name
(RefSeq) histone deacetylase 2-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03082  ATP-dependent chromatin remodeling
sjo03083  Polycomb repressive complex
sjo04110  Cell cycle
sjo04330  Notch signaling pathway
sjo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128376700
   03083 Polycomb repressive complex
    128376700
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    128376700
   04350 TGF-beta signaling pathway
    128376700
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128376700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sjo03036]
    128376700
Enzymes [BR:sjo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     128376700
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     128376700
   HDAC complexes
    Sin3A-HDAC complex
     128376700
    BRAF-HDAC complex
     128376700
    REST complex
     128376700
    SHIP complex
     128376700
    MiDAC complex
     128376700
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     128376700
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    128376700
  Chromatin remodeling factors
   NuRD complex
    128376700
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 128376700
NCBI-ProteinID: XP_053192465
LinkDB
Position
17:complement(25683541..25696071)
AA seq 489 aa
MAYTTAGGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETSVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPADTLDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNAANHKKGAKRQRVEEDKKEGEEKKAEIKEEEKTKESSAEKTDSKS
VKTEQTGSA
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcttacacgaccgcgggagggactaagaagaaggtgtgctactactacgacggtgac
gtaggaaattattactatggacaaggacatccaatgaaaccacatcgcatccggatgact
cacaacctgcttctgaactatggactgtacagaaagatggagatctatagaccacacaaa
gccacagctgacgagatgacaaaatatcacagcgacgactacatcaagttcctccgatcc
atacgacctgacaacatgtcagagttcagcaagcagatgcagcgcttcaacgttggagag
gactgtcctgtgtttgatggcctgtttgagttctgccaactctctgctggtggttctgct
gctggatcagtgaagctgaaccgacagcagaccgacatcgcagtgaactgggcaggagga
ctccaccacgccaagaagtccgaggcctctggattctgctacgtcaatgacatcgtgctg
gccatcttggagctgctcaagtaccaccagagggtgctctacatcgatatagacatccac
cacggtgatggagtagaagaggccttctacaccacagacagggtcatgactgtctccttc
cataaatacggggagtacttccctggaactggagacctcagggatattggagctggaaaa
ggcaaatattatgctgtcaacttccctctgcgggacggcatcgatgacgagtcgtatgag
cagatcttcaagcctgtgatggctaaagtgatggagatgtaccagcccagtgctgtggtc
ctccagtgcggtgcagactctctctcaggagaccgcctcggctgctttaacctcaccatc
cgcggacatgccaagtgtgtggagtacatcaagtccttcaacctcccgctgctcatgctg
ggcggaggaggatacaccatccgcaacgtggcccgctgctggacctacgagacgtccgtg
gctctggacacagacatccccgacgagctgccgtacaacgactactttgagtacttcggc
cccgacttcaagctgcacatcagcccgtccaacatgaccaaccagaacacacaggagtac
atggacaagatcaagcagcggctgtttgagaacctgcggatgctgcctcacgctccaggg
gtgcagatgcaggccatcccagaggacgccgttccagccgacacgctggacgaagacacg
gaggatccagacaaacggctgtccatccgcgccacagacaagaggatagcctgcgatgaa
gagttctctgactccgaggacgagggggagggaggcaggaggaacgcagccaatcacaag
aagggagccaaaaggcagagagtagaagaagacaagaaggaaggagaggagaagaaagct
gagataaaagaggaggagaaaacaaaggagagcagtgctgagaagactgactcaaaaagc
gtcaagactgagcagaccggcagtgcctga

DBGET integrated database retrieval system