Scomber japonicus (chub mackerel): 128376792
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Entry
128376792 CDS
T09718
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128376792
04082 Neuroactive ligand signaling
128376792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128376792
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128376792
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128376792
NCBI-ProteinID:
XP_053192620
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Position
17:27270080..27277894
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AA seq
403 aa
AA seq
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MRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHYWKDERLSFRSNKNQSMTFDG
RLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVLYSLRVTVTSMCSMDLSRFPL
DTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQFLIQEFHTTTKLAFYSSTGW
YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI
ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERKERKLRDRVTALP
LDLFVYLQLPCTCGMSHPGTMSASYSEVDVNNTGNYGLPEENGVKRERILVQLAMESDPI
TGHVGSGAYSSVWIDTHAIDKYSRVIFPGSYVLFNIIYWSIYC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccaggatttggagggcctgcagtcccagttggagtggacgttcaggttgaaagc
ctggatgctatttcagaggttgatatggactttaccatgaccttatacctgaggcactac
tggaaagatgaacgtctgtcctttagaagcaacaagaaccagagtatgacatttgacggc
cgcctggtgaagaagatctgggtacctgacatgttttttgtccactctaagaagtccttc
acacatgacaccaccactgacaacgttatgcttcgggtctacccagatggcaaagtcctc
tacagcctcagagtgacagtcacatctatgtgcagcatggacctgagtcgctttcctctt
gacacacagacatgctctttggagatagagagctatgcgtacacagatgatgacctaatg
ctgtactggaaggaagggaaccgctcattaaacacagacgaaagaatctctctctctcag
ttcctcattcaggagttccacaccaccaccaagctggcattctacagcagcacaggctgg
tacaaccgtctgtacatcaacttcactctacggcgtcacatcttctttttcctgctgcag
acctattttcctgccaccctgatggtcatgttgtcctgggtgtccttctggattgaccgc
agggccgtgcccgctagagtaccattaggtataaccacagtgctcaccatgtctaccatc
atcactggagtcaacgcctccatgcccagggtctcctacatcaaagctgtggatatttac
ctctgggttagttttgtctttgtcttcctgtctgtgatcgagtatgctgccgtcaactac
ctgtccacactgcaagaacgtaaggagaggaaactcagagatagggtgacggcgttacct
ttagacctttttgtctacttgcagcttccgtgtacctgtggtatgtcccatcctggtacg
atgtcagccagctacagtgaggtagatgtcaacaacacagggaactacggcctaccggaa
gagaacggggtgaaacgggagaggatactggtgcagctagcgatggagagcgacccgatt
accggccacgtcggctctggcgcttacagcagcgtctggatcgacactcatgctatagac
aagtactcacgggtcatctttcctggatcttatgtcctcttcaacatcatctactggtca
atctactgctaa
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