Scomber japonicus (chub mackerel): 128376891
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Entry
128376891 CDS
T09718
Name
(RefSeq) G-protein coupled receptor family C group 6 member A
KO
K04622
G protein-coupled receptor family C group 6 member A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128376891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128376891
G protein-coupled receptors [BR:
sjo04030
]
Metabotropic glutamate receptor family
Calcium-sensing
128376891
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
HTH_Tnp_Tc3_2
NCD3G
Peripla_BP_6
DDE_3
HTH_32
HTH_21
Ephrin_rec_like
HTH_12
HTH_24
HTH_33
GemA
Penicillinase_R
Motif
Other DBs
NCBI-GeneID:
128376891
NCBI-ProteinID:
XP_053192721
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All DBs
Position
17:complement(27594847..27607739)
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AA seq
1161 aa
AA seq
DB search
MKMCYLLYSLLPALMMLSSSPAIVNGCEFHQSICGAKAPGDIIIGIMLPCHRKVKALNDR
IRPDSFQCSNFDLLAFMKSLAAIHVIEEINAAGFLPGVRLGYMVCDTCSYASKALQNVEH
MFAFNATQNLQCNHTDFRPQVKIILGAMYSEVSIAVARLLNVYMVPLLSASSSSPDLNDK
LRFPVFLRTIPSDTHQTKAVAKLMAHYGWDWVGVVYGDDEYGKAAFQSFVKDAGENHVCL
AYQEVLPHHSDYEGTMQRIKQVAQQIRFSNAQVVLLILKGELVELLFKEMIRTNTSRTWI
ASDAWSRSRSLGHLDGINTIGDILGFSFVAVKSESFDNYLKNLKPTLGGYNHFIEEYKNL
RFNCSSECFSTNPPSYCPTHDLLTMKSDKACHTMDPLEQNDDFLTKALDTSETFSDRLAV
WATANALKTLLKCNSSSCLGEINFPPWKLLKELKMVNFTYEGQTYFFDKKGNFVNGYDLI
VWTQDGDHRNLHRIGRYHALDEQIELDEENVAWLSTVNSTTPQSRCSESCPPGSVKKILN
VSCCYNCTLCREGTFSDAPDLIACKKCPNGTWSLRGWSGCKPRTESYLRWSDPHPMAMVT
AAAFGIVVLIATLIIFLVYRDSPPMKRAEVRLSCVMMLGLAVSFSSVICFIDKPSVHLCR
ARQLMYAMGFTLCVSCILVKALRTFLAFLPFGQLRHRRLHRLYKPPAIIIVITILQGIIC
LLWLIFDSPQIDNTPPSLQSMKKVIQCCQGSTYIGFGIMLSYIALLAFISFLLAFKGRKV
PQEFSETGYIIFSMLIYLFVWICFIPVYITNREQSAPVQASVILVSCYGILFCHFLPKCH
EALWGSKTDTLEMIIRRATASVIKKFKEHGTVANLPRSGRKRKIDDGFQRKIVQMVEKNP
RLTSKQVQAALQSEGTTVSTRTIRRRLNEKGLYGRRPRKTPFLTQRHKKARLEFAKTYLR
KPKTFWKNVLWSDETKVELFGKGHQHRVFRKKNEAFKEKNTVPTVKHGGGSLMFWGCFAA
SGTGLLDRVHGIMKSEDYQQILQHNVGPSVRKLGLPQRSWVFQQDNDPKHTSKSTRKWFE
RKHWRLLKWPAMSPDLNPIENLWRELKMAVWKRHPSNLRDLEQFAKEEWSKIPAERCKKL
TDGYRKRLFAVILSKGCATKY
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtgttatttactgtacagcctcctgccagccctgatgatgctgagcagcagc
ccggctatagtcaatggatgtgaatttcaccaatcaatttgtggcgccaaagccccgggg
gatataataattggcataatgttgccatgtcatcgcaaagtgaaggctcttaatgaccgg
attagacctgacagctttcaatgctcaaattttgatctgttggcatttatgaaatcattg
gctgcaattcacgtgattgaggagataaatgcagctggcttcctcccaggagtgcgcctt
ggatatatggtgtgtgacacctgctcatacgcaagcaaagcattgcagaatgtggagcac
atgttcgcattcaacgccactcaaaatctgcagtgcaaccacactgacttcaggccccaa
gtcaagatcattttaggagctatgtactctgaggtgtctatcgcggtggccagactgctc
aatgtgtacatggtccctctgctgagtgcttcatcatcttcaccagatcttaatgataag
ctgcgtttcccagtttttctgcgtactattcccagtgacacacatcaaaccaaagcagtg
gccaaactgatggctcactacggctgggactgggtcggggttgtgtacggagatgacgaa
tatggcaaagcagctttccagagctttgtcaaggatgctggcgaaaatcacgtgtgcttg
gcctaccaggaagtgttgcctcatcatagtgattatgagggcaccatgcaacgcatcaag
caggtcgctcaacagatccgcttctccaatgctcaggtggtactgctcatcctcaaggga
gaactggtggagctcctctttaaggaaatgattcggaccaacacatcaaggacctggatt
gcaagtgacgcctggtccaggagcaggtcccttggccatctggatggcatcaacacaatt
ggtgacatcttgggcttttcctttgttgcagtgaagagtgaatcatttgataattatctc
aagaatcttaaaccaaccctgggaggatacaaccacttcattgaagaatacaaaaacctg
agatttaactgctcttcagaatgtttctcaaccaaccctccatcttattgtccaacacat
gatctcctgacaatgaaatctgataaagcatgccataccatggaccccctagaacaaaat
gatgactttctcactaaggctttggatacaagtgaaaccttcagtgacagattagcagtg
tgggccacagctaatgctctcaaaacactattgaagtgcaacagttcctcatgcttggga
gaaattaacttcccaccatggaagcttctcaaagaactgaagatggttaacttcacgtat
gaaggccagacttatttctttgacaaaaaaggcaattttgtcaatggttatgatctgata
gtgtggacacaggatggagaccacagaaaccttcataggattgggagataccatgctctt
gatgaacagatagaacttgatgaggaaaatgttgcctggctctcaacagtcaattccacg
acccctcagtctagatgttcagagagctgcccccctggctctgtcaagaagatcttgaat
gtgtcctgctgttacaactgcaccctttgtagagaaggaaccttttcagatgccccagat
cttattgcctgcaaaaaatgtcccaatggaacttggtcgctcaggggttggagcggatgt
aagccaagaacagagtcctaccttcggtggagtgaccctcaccccatggccatggtgaca
gccgcagcctttggtattgtggtcttgatagctaccctcattatctttttggtgtacaga
gattccccaccaatgaaaagagctgaggtgagactgtcctgtgtgatgatgttaggtctg
gcggttagcttctcaagcgtgatatgcttcattgacaagcccagtgtacacctgtgccgg
gcccgccagctcatgtatgccatgggcttcacactgtgtgtgtcctgcatactggtcaag
gccttacgtaccttcctagctttccttccctttggtcaacttagacataggagactgcac
agactttacaaaccacctgccattataatcgtcattactattctccagggaatcatctgt
cttctgtggctgatctttgattctcctcaaatcgataacacacctccgtcactacaaagc
atgaaaaaagtaatccagtgttgtcaaggtagcacatacataggttttggcatcatgtta
agctacatagctctgctagcatttatcagcttcctcttggcctttaaaggcaggaaggtt
cctcaggagttcagtgaaacaggctacatcatatttagcatgctaatatacttgtttgta
tggatatgtttcatcccagtctacattaccaacagagaacagagcgctcctgtgcaggct
tcagtcattctagtatcctgctatggcatcctcttctgccatttcctacccaagtgccac
gaagcactgtgggggtcaaaaaccgatacactggagatgattattaggagagccactgcc
agtgtcatcaagaagtttaaagagcatggcactgtggctaacctccccagatctggacgg
aaaaggaaaatcgatgacggatttcagcgaaagattgtgcagatggtggaaaaaaatcct
agactaacatccaaacaagttcaggctgccctgcagtccgagggtacaacagtatcaacc
cgtactatccgccggcgtctgaatgaaaaaggactctatggtagaagacccaggaaaacc
ccatttctgacccagagacacaaaaaagccaggctggagtttgccaaaacctacctgaga
aagccaaaaacattttggaagaatgttctctggtcagatgagacaaaggtagagcttttt
gggaaagggcatcaacacagagttttcaggaaaaaaaatgaggccttcaaagagaagaac
acggtccctacagtcaaacatggtggaggttctctgatgttttggggttgctttgctgcc
tctggcactggactgcttgaccgtgtgcatggaattatgaagtcagaagactatcaacag
attttgcagcataatgtagggcccagtgtgagaaagctgggtctccctcagaggtcatgg
gtcttccagcaggataatgaccctaagcacacttcaaaaagcactagaaaatggtttgag
agaaagcactggagacttctaaagtggccagcaatgagtccagacctgaatcccatagaa
aacctgtggagagagctcaaaatggcagtttggaaaaggcacccttcaaatctcagggac
ctggagcagtttgccaaagaagagtggtctaaaattccagcagagcgttgtaagaaactc
actgatggttaccggaagcggttgttcgcagttattttgtctaaaggttgtgctaccaag
tattag
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