Scomber japonicus (chub mackerel): 128376965
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Entry
128376965 CDS
T09718
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03410
Base excision repair
sjo04210
Apoptosis
sjo04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128376965 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128376965 (parp1)
04217 Necroptosis
128376965 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128376965 (parp1)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128376965 (parp1)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128376965 (parp1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
128376965 (parp1)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128376965 (parp1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128376965 (parp1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128376965 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
128376965
NCBI-ProteinID:
XP_053192806
LinkDB
All DBs
Position
17:17380741..17393171
Genome browser
AA seq
1014 aa
AA seq
DB search
MADSQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTGDIAGYSDLRWEDQEKVKKAIESGGVAGGKGDQKSGTKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELAFKPEYSAAQ
LKGFNALRAEDKEEMKKRLPAVKSEGKRKADVVDGASKKQKKEEAEEKTKLEEQLKNQSQ
LIWGLKDKLKKYCSTNDMKELLIANGQEVPSGESNVLDCLADGMAFGALEACKECTGQLV
FKGDAYYCKGDISAWTKCVFKTATPLRKDWVTPKEFHMVPFLKKFKFKRQDRLYPKEAPT
QTLTTAKAEPLASASSAPTKPLPEGAPSDKPLTGMRLLTVGKLVKNKDDLKVAVEELGGK
ITGTASKASLCLSTKKEVEKMSKKMEEARDAGVRVVSEDFLTDIKSSGKALQELVSLHAI
SPWGAEVKVEAQAPSAASKSGTLATKSTGKVKEEEGSSKSKKMKLTVKGGAAVDPDSGLE
NSAHVLEQGGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSALDNFLVVYKEKTGNNWGASNFTKYPNKFYPLEIDYGQDEEAVKRLTASAG
TKSKLARPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTDVQQAV
SNNVPEAQILDLSNRFYTLIPHDFGMKKPPLLNTLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNENDPIDINYDKLKTKIEVVDKATDEAEILTQYVKNTHAATHNTYTLEVQEVFKIV
REGEHQRYRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPGA
SVNLDGVQVPLGKGVNTNIDDTSLLYNEYIVYDVAQINMKYLLKVKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctcaggaggacaagctgtacaaagctgaatacgccaaaagcggccgtgca
tcgtgcaagaagtgcaaagaaaacatcgctaaagactcgctgaggatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccatttttcctgcttctggctg
agagcggcagctcagtctactggtgacatcgccggctattctgacctccgctgggaggac
caagaaaaggtcaaaaaggccatagaaagtggtggagttgctggagggaaaggtgaccag
aagagtggaactaaaggagagaagacactgaatgactttgctgtggaatacgccaagtcg
aaccgcagcacgtgcaaaggctgtgagcagaaaatagaaaaagatcagattcgcgtatct
aagaaaactgtggacccagagaagccccagttgggcctgatcgaccgctggtaccacaca
gcgtgtttcgtgagccgcagggaggagctggccttcaagcctgaatatagtgcagctcag
ctgaagggtttcaacgcgctacgagcagaagacaaagaggagatgaagaagagactccct
gctgtcaaatctgaagggaaacgtaaagccgatgtggtggatggagcttcaaagaaacag
aagaaagaggaagccgaagagaagacaaagctggaagagcagttgaagaatcaaagccag
ctgatttggggactcaaagacaaactgaagaaatactgttcaaccaacgatatgaaggag
ctgctcattgcaaatggccaggaggttccctctggagagtccaatgtgctcgactgcttg
gccgacggcatggcctttggtgctcttgaggcctgcaaggagtgcacgggccagctggtg
ttcaagggtgatgcttattactgtaaaggggacatctcagcttggacaaagtgtgtgttc
aaaactgcaacacccttacgcaaagactgggtcacccccaaggaatttcacatggttccc
ttcctgaaaaaattcaaattcaagcgacaggacaggttgtaccccaaggaggctcccact
caaaccctgaccacagccaaagccgaacctctggcgagtgcatccagtgccccaactaag
ccactaccagagggagcaccttcagacaagcctcttactggtatgagactgttaactgtg
ggcaaactcgtcaagaataaggacgatctaaaggttgctgtggaggagcttggtggaaag
attactggtactgccagtaaagcctctctctgcctcagcaccaagaaggaggtggaaaag
atgagtaagaagatggaggaagcgagggacgctggcgtgcgtgtggtctctgaagatttc
ctcacagacattaagtcgtcgggtaaagcgctccaggaactggtctccctgcacgctatc
tcaccctggggggcagaggtcaaagtcgaggctcaggctccatctgcagcctccaagtct
ggaacgctggctaccaagagcacaggcaaggtgaaggaggaggaaggtagtagcaaatcc
aagaagatgaaactcacagttaaaggaggagctgctgtggatccagattcaggtctggag
aacagcgctcacgtcttggagcagggtggtaaaatgtacagcgctacactgggcctcgtg
gacatcgtcagaggaactaactcctattataaactgcagttactggaggatgacgtacag
aaaaggtactgggtgttcaggtcatggggcagagtaggtacaaccattggaggaaacaag
ctggacaaattccacgacaagaactcagcgctagacaacttcctggttgtgtacaaggag
aagacggggaacaactggggcgcctccaacttcaccaaatatcccaataagttctaccca
ctggagatcgactacggacaggatgaggaagctgtgaagaggctgactgccagtgctggc
accaagtctaaacttgccagaccggttcaagaactgatcaagatgatctttgatgtggag
agcatgaagaaggccatggtggagtttgagatcgacctccaaaagatgccacttggaaag
ctgagtaagaggcagattcaaagtgcatacgctctcctcactgacgtacagcaggctgtg
tcaaataatgtgcctgaggcccagatactggatctctccaatcgcttttacactctgata
cctcacgactttgggatgaagaaacctccactgctcaacaccctggactacattcaagct
aaagttcagatgttggacaacctgttggatattgaagtggcatacagtctgctgagagga
ggcgcccaggacaacgagaacgatcccatcgacatcaactatgataaactcaaaactaag
attgaggttgttgacaaggccacagatgaggctgagatccttacgcaatatgttaaaaac
acccatgctgctacacacaacacttacacactggaagtgcaagaagtcttcaaaattgtt
cgagagggagagcaccaacggtaccgtcccttcgaagaactacacaatcgccagctactg
tggcacggctcacgcaccaccaactacgctggtatcttgtctcagggtcttcgcattgct
ccaccagaggccccagtgactggttacatgtttggtaaaggtgtgtactttgctgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagaccctgtaggtctcctgctg
ctggctgaagttgccctcggcaacatgcatgaattgaagaaggcctcccacatcacaaaa
ctacctaagggcaagcacagtgttaaaggtttgggtcgaactgctcctgatccaggtgcc
tcagtcaatttagacggggtgcaagtgcctctgggaaaaggagtcaacactaacattgat
gacacaagtctactgtacaacgaatacattgtgtatgatgtagcacagatcaacatgaag
tatctcctgaaggtcaagtttaactaccagacatccctgtggtga
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