Scomber japonicus (chub mackerel): 128376991
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Entry
128376991 CDS
T09718
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128376991 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128376991 (lrfn5b)
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
LRR_9
fn3
Sp38
V-set
C2-set_2
DHU1_N
Motif
Other DBs
NCBI-GeneID:
128376991
NCBI-ProteinID:
XP_053192839
LinkDB
All DBs
Position
17:complement(13574384..13587234)
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AA seq
798 aa
AA seq
DB search
MESLLVYLIVLGMAVKAHKVQICPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTNIKRKDFANMTKLVDLTLSRNTIGSIAPHAFKDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIQIGAFNDLTALEELDLSYNNLESAPWVAIQRMSNLHTLN
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPIFQRAGVLATSGIMGPLSFALSF
GGNPLRCNCELLWLRRLRREDDLETCASPQHLGGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVTLRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHTDGTLEILISTVKDSGSFTC
VASNPAGEAQQTVDLVIAKLPHITNNTIAEQEPDPGSSDIATVTKTGAETGGVPLGNAKT
SQEKKVVIAEATSTSALVKFNFQRSIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNILVNN
LAAGTQYDLCVLAIYDDQVTSLTATRVIGCIHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGDVDKALEMGDIRSLSSDGQLQGCGIPKSLSKQVLRPE
KNDKECLRVALPPPETVKQRPPVVVATTKPSVPDCTVSTSAASHSWHPASPGAPRPKRSS
APPKPSESRRAEAQADVELENMNRNNSSEVKIATAVALAVPGQPTKWTAVPRGPRPHQAP
RQYMTVPAGGVRVNRRHSLNADSYTERCYVAYPKTGASLRSKRSLSMSGELPQLKSTTNI
HRARDKLSRSEWLLESTL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcttctggtgtatctgatagttctcggcatggctgtgaaggcccacaaagtt
caaatctgtcccaaacgctgcgtctgccagatgcttaaccctaacttggcaactttgtgc
gacaaaaaggggctgctgtttgtgcccccgaacatcgacaggcacacggtggagatgcgt
ctgggggataattttgtaaccaacataaaacgcaaagactttgctaacatgaccaagcta
gttgacctgaccctctctcggaacaccatcggctccatcgcgcctcatgccttcaaagac
ctcgagaacctacgagcccttcacctcgacagcaaccggctaacccgaatcaccaacgac
acctttagtggcatgtccaaactgcaccacctcatcctcaacaacaaccagctcacccat
atccagattggggccttcaatgacctgacagccctggaagaactggatttatcctacaac
aacttggaaagtgccccatgggtggccatccagaggatgtctaatctccacaccctcaat
ttggaccacaacatgctcagctacatcccggagggcactttctctggtctgcagaagctc
aagaggctggacgtgacctccaacaagctccagaagcttcctccagaccctattttccaa
agagcaggggtcctggctacctcggggataatggggcctttgtcatttgcactgagcttc
ggagggaaccctctgaggtgtaactgtgagctgctctggctgaggaggttgcgcagggag
gatgatctggagacctgtgcttccccgcagcacctaggtggacgctatttctggactgtt
tcagaagaagagttcctgtgtgagcctcctctcatcaccaggcactctcaggagctgcga
gctttggagggtcagagtgtgactctgcgctgcaaggccaggggcgaccctgaccccatc
atccactggatcgcccctgacggacgccttatgtccaactcctccagggctgcggtccac
actgacggcacattggagatcctcatcagcactgtcaaggactcaggttccttcacctgc
gtggcctccaacccagctggcgaagcccagcagacggtggatctggtcattgctaaactc
cctcatatcaccaacaacacaatcgcagagcaggagcctgaccccggatcatcagatatc
gccacagtgaccaagactggggctgagacaggaggggtgcccctggggaatgcgaagaca
agccaggagaagaaagtagtaattgctgaggccacgtccacgtctgctctggtcaagttt
aactttcagaggagtattccaggaatccgcatgttccagatccaatacaatgggagttat
gatgattcgctggtatacagaatgatacccccgaccagtaagaacatcctcgtaaacaac
ctggcagctggtacacaatatgatctgtgtgttctggccatctacgacgaccaggtgacc
tcgctgacagccaccagggtgatcggttgtatccacttcaccaccgagccacagtacctg
aggtgccatttcatgcagtcccagtttcttggcggtaccattgtggttatcattggaggg
attattgtggcctcagtgcttgcttttatcatcttcctcattgtgcgctaccgggtgtgt
aaccaaggagatgtagataaggctctggagatgggggatattcggtcactgagcagtgat
ggacagctgcagggatgtgggattcctaagtctctctccaagcaggtcctgcgtccagag
aagaatgacaaggagtgcctcagagttgccctgccacccccggagacggtcaagcagcga
ccaccagtcgtggtagccaccaccaaaccctctgttcctgactgcactgtgtctacctct
gctgccagccacagctggcacccggcctccccgggggctccgaggcccaaacgttccagt
gctccaccaaaaccctcagagtcccgccgggctgaggctcaggcagatgttgagcttgaa
aacatgaatcggaataactcgtcagaggtaaaaatagccactgccgttgcactggctgta
cccgggcagcccaccaaatggactgctgttccaaggggtccaaggccccaccaggcccct
cgacaatacatgactgtgcctgcagggggtgtcagggttaaccgcaggcactcccttaat
gcagactcatatacagagcgctgctatgtggcctaccccaaaactggggccagtctgcgc
tccaagcggagcctgtcgatgagcggagagctgccgcagctcaagagcacaacaaacatt
caccgggccagggacaagctctccaggtctgagtggcttttggagagcactttatga
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