Scomber japonicus (chub mackerel): 128377010
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Entry
128377010 CDS
T09718
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128377010
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128377010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
LRR_6
NOD2_WH
PRY
LRR_4
SPRY
Motif
Other DBs
NCBI-GeneID:
128377010
NCBI-ProteinID:
XP_053192864
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All DBs
Position
2:1239863..1274084
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AA seq
1060 aa
AA seq
DB search
MDRQMDILKCGQVDTLRWHKEVFMNEDSRSKFSRLTLNIPQPTDNQCNKPQLAACRYDPF
YCRPETSERERSQRRRKAREAGEGEDEEPAGEPAGHQEPTIAERSSYLKCSGPCLSARST
GLRERVDPEKEEGLTPPSPPRIEISIQSWEGFLQDAREDVRRSDVDSGRGTVDQLFTLQG
YWRDHGSSHIQSTCALWGPCGPCTSGDFVGGVVGVWGLSLVSDPICDLLLEKGGLPSLGS
HIKTSRSLHIMCHIPVFCWITATVLENVVKSRKRGELPKTLTEMYIHFLVLQSKLKNVKY
DGGTETDPHWSKKSRKMNKSLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVCSGVFTQ
IFREERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVNLLEEQTTSRWSKVFKDKSTR
FYQSAVDEALKSPNGHLDLFLRFLLGLSLQTNQNLLRGLLTVTGISSQTKQKTVKYIKKK
ISENLSAERSINLFHCLNELNDCSLVEEIQQYLRSGSLSTDKLSPAQWSALVFILLSSEK
DLDVFDLKKYSASEEALLRLLPVVKASNKALLIDCYLSERSCAALSSVLSSQSSSLRDLD
LSHNNLQDSGVKQLSAGLESPHCGLETLRLTDCSLSERSCAALSSVLSSQSSSLRDLDLS
NNNLQDSGVKQLSAGLESPHCGLETLRLTDCNLSERSCVALSSVLSSQSSSLRDLDLSNN
NLQDSGVKQLSAGLESPHCGLETLRLTDCNLSERSCAALSSVLSSQSSSLRDLDLSNNNL
QDSGVKQLSAGLESPHCGLETLSLSGCLITEEGCASLASALSANPSHLRELDLSYNHPGD
SGEKLLSAGLKDLHWRLDTLRMDHGGPQRLKPGVRKYACELELDPNTMNGNLKLSDNNRK
VTRVMEYQSYPDHPHRFDFWSQLLCRNDLTGRCYWEVECRGEVYIAVSYRRISRRGDSYD
CRFGWNDQSWSLRCSYGGYSVCHNNSRTSISSSSSSSSSSSSSSSVSNRVAVYVDCPAGT
LSFYRVSSDTLIHLHTFNTTFTEPLYAGFRVWRESLSVSL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggacagacagatggacattctcaagtgtggacaggtggacactctcaggtggcacaaa
gaggtgtttatgaatgaggacagcaggtcaaagttcagcagactgaccttgaacatccca
cagccgacggacaatcagtgcaacaagccacagctggcagcttgcaggtatgaccctttt
tattgcaggccagagacgtcagagagggagaggagccagagacgaaggaaggccagagag
gccggagaaggagaagatgaggaaccagccggagaaccagcaggccaccaagaacctacc
atcgcagaaagatcctcctacctgaagtgcagcggcccgtgtctgtcggcgcggagtacc
ggactgagggaacgagtagatccggagaaggaagaaggtctcacccccccatcacctccg
agaattgaaatcagcatccagtcctgggaaggattcctccaggacgctcgggaggatgtg
aggaggagtgatgtggactctggccgtggaacagtggaccagctcttcaccctgcaggga
tactggagggatcatgggagttcacacatccagtctacatgtgctttgtggggaccttgt
ggaccgtgtacctcaggggactttgtgggaggtgttgtgggagtttgggggctgtccctg
gtctctgatcccatttgtgatcttctgctggaaaaaggtggacttccctctctcgggtcc
cacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatc
actgctacagttctggagaatgtggtgaaaagcagaaagagaggagagctgcccaagaca
ctgactgagatgtacatccacttcctggtacttcagtccaaactgaagaacgtcaagtat
gatggaggaactgagacagatccacactggagtaagaagagcaggaagatgaataagtct
ctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagac
ctgacagagtgtggcatcgacatcagagcagcctcagtgtgctcaggagtgttcacacag
atctttagagaggagagagggctgtaccaggacaaggtgttctgcttcgtccacctgagc
cttcaggagtttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaac
ctgctggaagaacaaacaacatccaggtggtctaaagtctttaaagacaaatcaacacgt
ttctaccagagtgctgtggacgaggccttaaagagtccaaatggacacctggacttgttc
ctccgcttcctcctgggtctttcactgcagaccaatcagaatctcctacgaggtctgctg
acagtgacaggaattagctcacagaccaaacagaaaacagtcaagtacatcaagaagaag
atcagtgagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactg
aatgattgttctctagtggaggagatccaacagtacctgagatcaggaagtctctccaca
gataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaa
gatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctg
ctgccagtggtcaaagcctccaacaaagctctactgattgactgttacctctcagagaga
agctgtgcagctctgtcctcagtcctcagctcccagtcctctagtctgagagatctggac
ctgagtcacaacaacctgcaggattcaggagtgaagcagctttctgctggactggagagt
ccacactgtggactggaaactctcagactgactgactgtagcctctcagagagaagctgt
gcagctctgtcttcagttctcagctcccagtcctctagtctgagagatctggacctgagt
aacaacaacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacac
tgtggactggaaactctcagactgactgactgtaacctctcagagagaagctgtgtagct
ctgtcttcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaac
aacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgtgga
ctggaaactctcagactgactgactgtaacctctcagagagaagctgtgcagctctgtcc
tcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaacctg
caggattcaggagtgaagcagctttctgctggactggagagtccacactgtggactggaa
actctcagtctgtcaggatgtctgatcacagaggaaggctgtgcttctttggcctcagct
ctgagtgccaacccctcccatctgagagagctggacctgagctacaatcatccaggagac
tcaggagagaagcttctgtctgctggactgaaggatctacactggagactggacactctc
aggatggaccatggtggaccgcagagactgaaacctggtgtgaggaagtatgcctgtgaa
ctggaactggatccaaacacaatgaacggaaacctcaaactgtctgataacaacaggaag
gtgacacgtgtgatggagtatcagtcatatcctgatcatccacacagatttgacttctgg
tctcagctgctgtgtagaaatgatctgactggtcgctgttactgggaggtcgagtgcaga
ggagaagtttatatagcagtgagttacagaagaatcagcaggagaggagacagttatgac
tgtaggtttggatggaatgatcagtcctggagtctgagatgctcttatggtggttactct
gtctgtcacaataacagcagaacatccatctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcact
ctgtccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccaca
ttcactgaacctctgtatgctgggtttagagtctggagggagagtctctctgtgtctctg
tag
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integrated database retrieval system
