Scomber japonicus (chub mackerel): 128377073
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Entry
128377073 CDS
T09718
Symbol
extl3
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sjo01100
Metabolic pathways
Module
sjo_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128377073 (extl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128377073 (extl3)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
128377073 (extl3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
128377073 (extl3)
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
O-Glycan
128377073 (extl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
ADIP
MscS_porin
EXOC6_Sec15_N
TBK1_CCD1
TPR_MLP1_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
128377073
NCBI-ProteinID:
XP_053192937
LinkDB
All DBs
Position
17:21605295..21635839
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AA seq
914 aa
AA seq
DB search
MQRNGGGVGAGGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPDKRIFGP
RPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEIARLNLRIEACKRSIDSAKQD
LLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKEDPGLPPPKSARSCRLRSCFDYAR
CPLTSGFPVYVYDTGSYLWGDYLDPLVKQAFAASVKSNIYVTDNPSIACLYLVLVGELQE
SPSSPPPSELEKQLKALPYWRSDGHNHVLVHLSRKSMTQNFLYNVSTGRAAVAQSTFFEQ
QYREGFDLVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGERVESLRSSLQETPPQSFE
EEMEGDPPADYDDRIIGTLKAVQDSHLDQVLVEFTCKNPRPSLPTEWALCGEREDRLEVL
KASTFALVISPGDGQLVASAGCGMRLFEAMEVGAIPVVLGDHSRLPYHQLIRWSEAAIIV
PKPRVTELHFLLRSLSDNDMLAMRRQGRFLWETYFSTSENVLNTILANIRTSIQVPAAPI
KEEPAQEIPHKAGKLAGTDANLADNGDLDLGPVETEPPYASPRFLRNFTYTAADTYRAWN
RAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGGGTGGSGKEFQAALGGNVPREQFTV
VMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTEKNSL
NNRFLPWDAVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDVNHQSW
LYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHITR
KPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLFK
TRLPHDKTKCFKFI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtaacggtggtggagtgggtgccggaggacagccatgggttttgaggcgtgtg
cgtctcacgtggctcagtttcatgctcttcttcatcctggtcttcttcccactcatcgcc
cactactacctcactaccattgacgaagctgggggtcccgacaagcgcatctttgggccg
cggcccggtggcgaattgtgcgaggccaaacatgtgcaggatctgtgtcgcatccgtgag
tcggtcagcgaggagctgctacagctggaggccaagaggcaggagctcaacggggagatc
gcccgactcaacctgcgcatcgaggcctgcaagcgcagcattgacagtgccaagcaggat
ctgcttcagctgaagaatgtcatcagccagacggagcattcatataaagaactgatggcc
cagaaccagcccaagctgtctttacctgtcaggttgctgccagacaaggaggatcctggc
ctgccaccacccaaatctgcacgctcctgccgcctgcgctcctgcttcgactatgctcgc
tgtcctcttacatctgggtttcctgtatatgtctatgatacaggctcctatctgtggggg
gattatcttgaccctctagtaaagcaagcctttgcagcatccgttaagagcaacatttat
gttacagataatcccagcattgcctgtctgtatctggtgctggtaggggagctacaggag
tctccctcctccccaccaccttctgagctggagaagcaactaaaagctcttccttactgg
agatctgatggacacaaccatgtgctagtgcatctctctagaaagtccatgacacagaac
ttcctgtataatgtgagtacaggacgagctgcagtcgcgcagtccaccttcttcgagcag
cagtatcgcgaaggcttcgacctagtggtgtccccactagtccatgccctctctgaaccc
aactttctggaagtgccccctcaggttcctgtgaagaggaaatatctcttcactttccag
ggggagagggtggagtcactgaggagcagtttgcaagagacgccccctcaatcttttgag
gaggaaatggaaggagatccaccagctgactatgatgatcgcatcattggcaccttaaag
gcagtgcaggacagccacttggatcaggtgctggtggagttcacctgcaagaacccgagg
cccagtttgccgactgagtgggctctttgtggagagagggaggacaggctggaggtgctc
aaggcttctacttttgccctggtgatttctccgggggatggtcagctggtggcctcagca
ggctgtggaatgaggctctttgaggccatggaggtaggggccatcccagtcgtgctagga
gaccactccagactaccataccaccagttaattcgatggagtgaagctgctattatagtc
cctaaacctcgtgtgacagagctacacttcttgctgcgcagcctatcagacaatgacatg
ttagctatgaggcggcagggccgctttctgtgggagacgtacttctccacatcagagaat
gttcttaatactatcctggccaacatccgaaccagcattcaggttcctgctgcacctatc
aaagaagagcctgcacaagagattcctcacaaagcaggaaaactagcaggaactgatgcc
aacctggcggacaatggtgaccttgatttgggtcccgttgagacagagcccccctacgcc
tctccacgctttctccgcaacttcacatacacagctgcagacacctacagagcatggaac
cgtgctccaggacctttccatctgtttccacacacccctctggaccctgtcctcccctct
gaagccaaattccttggctcaggtactggtttcaggcctatcggtggaggtacgggaggc
tcagggaaggagttccaggcagccttgggagggaacgtgccccgagaacagttcaccgtg
gtcatgctgacttacgagagggaggaggtactgatgaactcactggagaggctgaatgga
ctgccatacctcaacaaggtggtggtggtgtggaattcacccaagcctccttcagatgac
ctgctgtggccagacatcggcctccccattgtggtcgttcgcacagagaagaacagcctc
aacaaccgcttcctgccatgggacgcggtggaaaccgaggccatcctctctatcgacgac
gacgcccatctccgccacgatgagatcatgtttgggttcagagtgtggcgggaggccaga
gatcgcatcgtgggtttccccgggaggtatcacgcgtgggacgtcaaccatcagtcctgg
ctttacaactccaactactcctgtgagctctccatggtcctgacaggagctgcttttttc
cacaagtactacgcatacctgtactcctacgtcatgccccaggccatcagggacatggtg
gacgagtacataaactgcgaggacattgccatgaacttcctggtgtctcacatcacccgc
aaaccacccatcaaggtaacctctcgttggactttccgttgccccggctgccctcaagct
ctttcacacgatgactcgcatttccacgagcgccacaagtgcatcaacttcttcgtcaag
gtgtatggctacatgccgctgctctacacgcagttccgcgtggactcggtgctatttaag
actcgtttgccgcacgataagaccaagtgcttcaagttcatctag
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