Scomber japonicus (chub mackerel): 128377153
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Entry
128377153 CDS
T09718
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03082
ATP-dependent chromatin remodeling
sjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128377153 (yy1b)
03083 Polycomb repressive complex
128377153 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128377153 (yy1b)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128377153 (yy1b)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128377153 (yy1b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128377153 (yy1b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128377153 (yy1b)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
128377153 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
TFIIIA_zf-C2H2
zf-C2H2_4
Raffinose_syn
IBR
Motif
Other DBs
NCBI-GeneID:
128377153
NCBI-ProteinID:
XP_053193034
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All DBs
Position
17:13557857..13564271
Genome browser
AA seq
439 aa
AA seq
DB search
MCETVFVRSPKKPEHNTGVNERGKLADFNMASGDTLYIETDGSEMPAEIVELHEIEVETI
PVETIETTVVGGDDDDEDEDEDDDDDDGQPMIALQPLVTDDPGSIHHHHHHHHHQEVILV
QTREEVVGGDDSDLHTGGGAGFEDQILIPVPAPGVEDEYIEQTLVTVAGKSSVGRVKRGG
GAGGKKAGKKSYLSGAEAGGRKWEQKQVQIKTLEGEFSVTMWASDDNKDIDHESVVEEQI
VGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARSPRPKDIQFLTTEDQDQPAYF
ATINRKMKPRKVKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFV
ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA
QSTNLKSHILTHAKAKNNQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagactgtgtttgtgaggtcccccaaaaaaccggagcacaacacgggcgtgaat
gagagaggcaagctggcggacttcaacatggcatccggagatacgctgtacattgagaca
gacggctcggagatgccggccgagatcgtggagctccacgagatagaggtggagacgata
ccggtggagacgatcgagaccacggtggtcggcggggacgacgacgatgaggatgaggat
gaggacgacgacgacgacgatgggcagcccatgatcgctctgcagccgctggtcacggac
gaccccggctccatccaccaccaccatcaccatcaccaccatcaggaggtgatcctggtg
cagacccgtgaggaggtggtcggcggggatgactcggacctgcacacgggcggcggcgct
gggttcgaggatcagatcctcatcccggtaccggcaccgggagtggaggacgaatacatc
gagcagactctggtgactgtggccgggaaaagctccgtaggtcgggtgaagaggggaggc
ggtgccggcgggaagaaagcggggaaaaagagctatttaagtggcgcagaggccggtgga
agaaaatgggagcagaagcaggtgcagataaagacactggagggggagttttctgtcaca
atgtgggcttcggatgacaataaagacattgaccatgagtcggtggtggaagagcagatc
gtcggggagaactcccctccagactactctgagtacatgacagggaagaagctgccccca
ggtggcatcccagggatcgacctctcagaccccaaacagctggccgaatttgccaggagt
ccaagacccaaagatattcagtttctcaccactgaagaccaagaccaaccagcatatttt
gcaacaattaaccgcaagatgaaacccaggaaagtcaaagaggacgacgctccccggacg
atagcttgccctcataaaggctgcacaaagatgttcagggataactcagccatgaggaag
catctccacacccacggaccccgcgtgcacgtctgtgccgagtgcggaaaggcctttgtg
gagagctccaaacttaaacgtcaccaacttgttcacacaggggagaaacccttccagtgt
acctttgaagggtgcgggaaaaggttttctctcgacttcaacctgcgcacacacgtgcga
atccacactggagaccggccctacgtctgccctttcgacggctgcaataagaaattcgcc
cagtcaaccaacctaaagtctcacattctcacacacgccaaagccaaaaataaccaatga
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