Scomber japonicus (chub mackerel): 128377209 Help Entry 128377209         CDS       T09718                                  Symbol rfc1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03030   DNA replication sjo03410   Base excision repair sjo03420   Nucleotide excision repair sjo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     128377209 (rfc1)    03410 Base excision repair     128377209 (rfc1)    03420 Nucleotide excision repair     128377209 (rfc1)    03430 Mismatch repair     128377209 (rfc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sjo03032]     128377209 (rfc1)    03400 DNA repair and recombination proteins [BR:sjo03400]     128377209 (rfc1) DNA replication proteins [BR:sjo03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     128377209 (rfc1) DNA repair and recombination proteins [BR:sjo03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      128377209 (rfc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_5 Rad17 AAA_7 AAA_30 RuvB_N BRCT_2 AAA_14 nSTAND3 AAA_33 AAA_17 AAA_16 RNA_helicase NTPase_1 AAA_18 NPHP3_N AAA_19 NLS_NINJA_AFP Motif Other DBs NCBI-GeneID:  128377209 NCBI-ProteinID:  XP_053193096 LinkDB All DBs Position 2:21153608..21165507 Genome browser AA seq 1171 aa AA seqDB search MDIRRFFAPTAVKPSVQKQNGNHKTDEKKINSPLSSDEEVKKRKKETTKVKSPKMEAKRK NSEKKRKKHAVIESDSEEEKPARKSKKSPKEKQKTNKAEPPPKKDPVQYVSETDSDSDNF QSLKKSSKSKQNGTTKPTKSNADSARRDVKEGVKSPVRTSSAQGKTTVKSPSVPATPKSA PPPQPKHTPTSVLDYFGSTTVQRSEKKLVVSTKRKAPTLDTDELSDEQIAQQLQLDEDME LEKQVHEDEEFARTLAMLDEEPLAKKARKDSKQDHTASQKKSSPSKTNRKDSMSEDVISP SPKKNPAPVKASSKLAMMKKKDDEKDKGAKSQTPILATKIKISPKKEPLASTSSPVKFTP KTALKTSPTKTESEQSTSPNDAEKKKVNSTAYRNFLNREGPRALGSKEIPTGEENCLEGC VFVVTGVLESMERDDAKSLIERYGGKVTGNISKKTTYLVQGRDSGVSKLEKAESLGTKII NEDDLLELIRTKPGKKSKYEIAAEAESKASKTRTPPSQTSRSTPKAQKISPSKGNSRSPH TPSPSKTGLTQGHRARTEHGRTPPGRGSGHMVQRGLGLSSPSSSSSAPEPSSPSTTGEGV SLLWVDKYRPNSLKAVIGQQGEQSCANKLLRWLQNWHKHHSGNASKPAAARFGKFGGGKD DGSSHKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKQVVAESLNNTSI ETFYKGTSQTVSSKHVLIMDEIDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHMKI RSLANYCFDLRFQRPRVEQIKGAMMSLAFKEGIKIPPPALNEIILASNQDVRQVIHNLSM WSAKDKVMTYDQCKSDAASARKDMKMGPFDVCRKVFISGEEKSQMSLIDKSDLFFHDYSL APLFVQENYVHVRPAAAGGDLKSHLVLLSKTADSICDGDLVDRRIRSGQNWSLLPTQAMY ASVIPGELMRGYMSQFPTFPSWLGKYSSTNKHSRIVQDLASHMGLKTLSSRQAVNLDYLY YLRQSLLAPLQQDGAEGASQTVQLLDDYQLVKEDVDSIMEISMWGGQPDPYSKLDSKVKA AFTRAYNKEVHLTPYSLQAVKKGRRGGGGGGESELGGEDMEKETQESEDEGDSLKADAMI KQKKTKPTKESKKEDSGKGKGKGKGKGKAKK NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggacatcaggcggttctttgcaccgacagcagtgaagccttcggtgcagaaacaaaat ggaaaccacaaaacagacgagaagaaaattaatagtcctctttcttcagacgaggaggtg aaaaagagaaagaaagagaccacaaaggtcaaaagccccaaaatggaggcgaaacgcaag aatagtgagaaaaaacggaagaagcatgcagtcatagaatcagactcagaggaggagaag cctgcacgaaagtcaaaaaaatctcccaaagagaaacagaagaccaacaaggcagagccc cctcccaaaaaagatcctgtgcagtacgtctctgaaacagactcagacagtgacaacttt cagtccttgaagaaatcctcgaaatccaagcagaatggcaccaccaaaccgacaaagtca aatgcagacagtgctcgtcgagatgtcaaagagggggtgaagtcacctgtcaggacctcc tctgctcaggggaaaactacggtgaagtctccctctgtgcctgccactccgaagtcagct ccgcctcctcagcccaaacacacccccacctcagtgctcgactacttcggcagcacgact gttcagcgctcggagaagaaactggtggtcagcaccaaacggaaggcgccaactctggac acagacgagctcagtgatgagcaaattgcccaacagctgcagttggatgaggacatggag ctggaaaagcaggtccatgaagacgaggagtttgccagaactttggccatgctggatgag gagccactggcgaaaaaggctcgcaaagactcaaaacaagaccataccgcatctcagaaa aagagcagcccatcaaagaccaaccgaaaggatagtatgtcggaggatgtgattagtcca tctccgaagaagaaccccgctcctgtcaaagccagctccaaactggctatgatgaagaaa aaggatgacgagaaagataaaggtgcaaagagtcaaacacccattttggccacgaaaatt aaaatctctcccaaaaaagaacccctcgcttcgacgagctcacccgtgaagtttacaccc aagacagcacttaaaacttctcccacaaaaacagagtctgagcagagtacaagtcccaac gacgcagagaagaagaaagtcaactctacagcttacaggaacttcctcaacagagaggga ccacgagctctgggctctaaggaaatcccaacgggagaagaaaactgtttagagggctgt gtgtttgtggtgacgggggtcctagagtcaatggagagagatgatgccaaatccctcatt gagcgctacggaggcaaggtgacgggcaacatcagcaagaagaccacttacctggtgcag ggcagagacagcggagtgtcaaagctcgagaaggcggagagtttgggtaccaagatcatt aatgaagatgatctactggagctgatcagaaccaaaccgggaaagaagtccaagtacgag atcgcagcagaggctgagagcaaagcctcaaagaccaggactccccccagccagacctca aggagcacccccaaagcccagaagatctctccctctaagggtaactccaggtcccctcac accccgagtccatcaaagactggcctcacacaagggcacagagccaggactgaacatggt cgcaccccacctggaagaggctcaggtcacatggtccagagggggctgggcctttcttct ccttcctcttcatcttcagccccagaaccatcatccccatcaactactggggagggtgtc agtctgctgtgggtggacaagtaccgcccaaactctctgaaggctgtgattggccagcag ggggagcagagctgtgccaataagctactccgctggttgcagaactggcacaaacaccac agcgggaatgcctccaagccagcagcagcaaggtttggtaagtttggaggtgggaaagat gatggatcaagccacaaagctgctctgctctctggacctccgggagtggggaagaccacc actgctgctctcgtctgtgaggagttgggcttcagctacgtggagatgaacgccagctgc actcgtagcaaaaacagcctgaaacaggtcgtcgcagagtcgctcaacaacactagcatt gagaccttctataaaggcacgtctcagacagtgagcagtaaacacgtcctgatcatggat gagattgacggcatggctggcaacgaggatcgtggaggaatccaggagatgatcggcctg atcaagcagtccaagattcccatcatctgcatgtgcaacgatcgtaaccacatgaagatc aggtcactggccaactattgctttgatctgcgcttccagaggccgcgagtggaacagatt aagggagctatgatgtccctcgctttcaaggagggtatcaagatcccgcctccggctctt aacgaaataatcctagcctccaatcaggatgtccgacaggtgatccacaacctgagcatg tggtcggccaaggacaaggtgatgacgtatgaccaatgcaagtctgacgcagccagtgcc cgcaaggacatgaaaatggggccttttgacgtttgcaggaaggtgtttatctcaggagag gagaaatcccagatgagcctcatcgacaagtcggacctctttttccatgactactcgcta gcgccacttttcgtccaagagaactacgtgcatgttcggccagctgctgctggcggtgat ctcaagtcccacctggtgttgctcagcaagaccgctgactccatctgtgatggagacctg gtggacagacgcatccgctctgggcagaactggtcactgctgcccacccaggccatgtat gccagtgtgataccaggcgagctcatgagaggctacatgagtcagttccctactttcccc agctggctcggcaaatactcctccaccaacaaacattcccgcatcgtccaggatctggcc tcacatatgggtttaaagacgttgagcagcaggcaggcggtgaacctggactacctgtac tacttgcggcagtcgctgttggccccacttcagcaggacggagcagagggcgccagtcaa actgtgcagctgctggacgactatcagctcgtcaaggaggacgtcgacagcatcatggag attagcatgtggggcggacagccagacccctactccaaactggactctaaggtgaaggca gctttcacacgcgcctacaacaaagaggttcacctgacgccgtactccctgcaagcagtg aagaagggtcgtcgaggcggcggcggcggtggagagtcggagctgggaggggaggacatg gaaaaagaaactcaggagtctgaggacgaaggtgacagcctcaaagctgacgccatgatc aaacagaagaaaaccaaacccaccaaggagtcaaagaaagaggattctgggaaggggaag ggtaaaggcaaaggcaaaggcaaggctaagaaatga

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